RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 CD97P48960 835 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 MLLT10P55197 1068 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 UFM1P61960 85 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 TIAL1Q01085 375 aaKnown RBP eCLIP20.2■□□□□ 0.82
TMEM260-203ENST00000539559 SEMA3AQ14563 771 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 ARTNQ5T4W7 220 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 DCDC5Q6ZRR9 648 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 CENPSQ8N2Z9 138 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 SLC15A4Q8N697 577 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 CALML6Q8TD86 181 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 BORCS5Q969J3 196 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 ACDQ96AP0 544 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 COX4I2Q96KJ9 171 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 TBCCD1Q9NVR7 557 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 IKZF3Q9UKT9 509 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 COQ6Q9Y2Z9 468 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 OAS3Q9Y6K5 1087 aaKnown RBP20.2■□□□□ 0.82
TMEM260-203ENST00000539559 TRPM7Q96QT4 1865 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 TCRBV5S2A0A599 114 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 MAP4P27816 1152 aaKnown RBP20.2■□□□□ 0.82
TMEM260-203ENST00000539559 SHMT2P34897 504 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 PIGFQ07326 219 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 ZNF829Q3KNS6 432 aaPredicted RBP20.2■□□□□ 0.82
TMEM260-203ENST00000539559 ITIH5Q86UX2 942 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 KIAA2013Q8IYS2 634 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 TTC16Q8NEE8 873 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 TRMOQ9BU70 441 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 SLC52A3Q9NQ40 469 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 MRGBPQ9NV56 204 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 TNPO2O14787 897 aaKnown RBP20.2■□□□□ 0.82
TMEM260-203ENST00000539559 IRAK2O43187 625 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 INHBBP09529 407 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 HAPLN1P10915 354 aaPredicted RBP20.2■□□□□ 0.82
TMEM260-203ENST00000539559 LBPP18428 481 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 AXLP30530 894 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 CD300CQ08708 224 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 BNIP2Q12982 314 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 SLC14A2Q15849 920 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 TIGD2Q4W5G0 525 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 BLOC1S3Q6QNY0 202 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 ACOX2Q99424 681 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 RTP3Q9BQQ7 232 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 NOL6Q9H6R4 1146 aaKnown RBP20.2■□□□□ 0.82
TMEM260-203ENST00000539559 SDR39U1Q9NRG7 319 aaPredicted RBP20.2■□□□□ 0.82
TMEM260-203ENST00000539559 GID8Q9NWU2 228 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 Q9Y3F1 56 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 ARL5AQ9Y689 179 aa20.2■□□□□ 0.82
TMEM260-203ENST00000539559 CLASP2O75122 1294 aaKnown RBP20.19■□□□□ 0.82
TMEM260-203ENST00000539559 WISP3O95389 354 aaPredicted RBP20.19■□□□□ 0.82
TMEM260-203ENST00000539559 SLC10A3P09131 477 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 FAM163BP0C2L3 166 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 EEF1DP29692 281 aaKnown RBP20.19■□□□□ 0.82
TMEM260-203ENST00000539559 PSEN2P49810 448 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 NFATC3Q12968 1075 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 PCBP1Q15365 356 aaKnown RBP eCLIP20.19■□□□□ 0.82
TMEM260-203ENST00000539559 TIGD5Q53EQ6 642 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 GALNT18Q6P9A2 607 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 DDHD1Q8NEL9 900 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 ANAPC2Q9UJX6 822 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 C1orf232A0A0U1RR37 186 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 FUOMA2VDF0 154 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 E9PAM4 449 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 H0Y858 1186 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 ZNF701M0R085 212 aaPredicted RBP20.19■□□□□ 0.82
TMEM260-203ENST00000539559 MYL3P08590 195 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 BRCC3P46736 316 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 OR4D2P58180 307 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 RELAQ04206 551 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 DCP1BQ8IZD4 617 aaKnown RBP20.19■□□□□ 0.82
TMEM260-203ENST00000539559 BLOC1S5Q8TDH9 187 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 BIRC7Q96CA5 298 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 DOK1Q99704 481 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 CHID1Q9BWS9 393 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 CATSPERBQ9H7T0 1116 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 TLR9Q9NR96 1032 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 PKD2L2Q9NZM6 624 aa20.19■□□□□ 0.82
TMEM260-203ENST00000539559 ENPP3O14638 875 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 CRCPO75575 148 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 TCF3P15923 654 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 LHX1P48742 406 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 AAK1Q2M2I8 961 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 SIRPB2Q5JXA9 342 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 KANK2Q63ZY3 851 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 ANKRD34AQ69YU3 496 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 FAM117BQ6P1L5 589 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 PRMT9Q6P2P2 845 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 LRRTM3Q86VH5 581 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 OR13C4Q8NGS5 318 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 PPP1R14BQ96C90 147 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 UXTQ9UBK9 157 aaPredicted RBP20.18■□□□□ 0.82
TMEM260-203ENST00000539559 FAM50BQ9Y247 325 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 HS3ST4Q9Y661 456 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 KANSL1LA0AUZ9 987 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 SUPT3HB4E1H0 165 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 RSL1D1O76021 490 aaKnown RBP20.18■□□□□ 0.82
TMEM260-203ENST00000539559 PEX11BO96011 259 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 LDLRP01130 860 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 IL7RP16871 459 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 HRH2P25021 359 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 AGTR2P50052 363 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms