RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 CCDC13Q8IYE1 715 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 PQLC3Q8N755 202 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 CCHCR1Q8TD31 782 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 LRRN4Q8WUT4 740 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 JPH3Q8WXH2 748 aaPredicted RBP9.61□□□□□ -0.87
CHD4-207ENST00000537634 EXTL1Q92935 676 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 ART4Q93070 314 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 COX14Q96I36 57 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 LYSMD1Q96S90 227 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 DDA1Q9BW61 102 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 ADGRE3Q9BY15 652 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 FAM117AQ9C073 453 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 DEF6Q9H4E7 631 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 NENFQ9UMX5 172 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.61□□□□□ -0.87
CHD4-207ENST00000537634 HEMK1Q9Y5R4 338 aaPredicted RBP9.61□□□□□ -0.87
CHD4-207ENST00000537634 CFAP46Q8IYW2 2715 aa9.61□□□□□ -0.87
CHD4-207ENST00000537634 TRBV23OR9-2A0A075B6M9 112 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 LRRD1A4D1F6 860 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 KCNK1O00180 336 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 DNAJC6O75061 913 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 JCHAINP01591 159 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 ACP5P13686 325 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 SLC2A4P14672 509 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 MPSTP25325 297 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 MAN1A1P33908 653 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 SPINT3P49223 89 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 HHEXQ03014 270 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 SLC10A2Q12908 348 aaPredicted RBP9.6□□□□□ -0.87
CHD4-207ENST00000537634 NFATC3Q12968 1075 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 SLC18A3Q16572 532 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 QPCTQ16769 361 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 LINC00303Q3SY05 128 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 HENMT1Q5T8I9 393 aaKnown RBP9.6□□□□□ -0.87
CHD4-207ENST00000537634 TMEM71Q6P5X7 295 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 SFRP1Q8N474 314 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 IL22RA1Q8N6P7 574 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 EXD3Q8N9H8 876 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.6□□□□□ -0.87
CHD4-207ENST00000537634 SH3KBP1Q96B97 665 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 RNF157Q96PX1 679 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 HERPUD2Q9BSE4 406 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 MLPHQ9BV36 600 aaPredicted RBP9.6□□□□□ -0.87
CHD4-207ENST00000537634 PACSIN1Q9BY11 444 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 ASPSCR1Q9BZE9 553 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 FAM83DQ9H4H8 585 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 RMI1Q9H9A7 625 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 SLC39A1Q9NY26 324 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 DTLQ9NZJ0 730 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 TMEM9Q9P0T7 183 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 KCNK6Q9Y257 313 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 PRKAB1Q9Y478 270 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 PCDHGA3Q9Y5H0 932 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 HEY1Q9Y5J3 304 aa9.6□□□□□ -0.87
CHD4-207ENST00000537634 OAS3Q9Y6K5 1087 aaKnown RBP9.6□□□□□ -0.87
CHD4-207ENST00000537634 ATMQ13315 3056 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 RGSL1A5PLK6 1076 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 EFCAB7A8K855 629 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 FADS2P1A8MWK0 482 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 B4E171 279 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 ANKRD66B4E2M5 251 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 SNX2O60749 519 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 EML2O95834 649 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 SLC4A1P02730 911 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 MMP2P08253 660 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 FAM87AP0C7U9 286 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 SFTPCP11686 197 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 WT1P19544 449 aaPredicted RBP9.59□□□□□ -0.87
CHD4-207ENST00000537634 KDELR1P24390 212 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 HNRNPH3P31942 346 aaKnown RBP9.59□□□□□ -0.87
CHD4-207ENST00000537634 TSPAN7P41732 249 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 MAPK9P45984 424 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 RAB15P59190 212 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 CYP4F2P78329 520 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 IFI35P80217 286 aaPredicted RBP9.59□□□□□ -0.87
CHD4-207ENST00000537634 PPIDQ08752 370 aaKnown RBP9.59□□□□□ -0.87
CHD4-207ENST00000537634 AP1B1Q10567 949 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 ZBTB17Q13105 803 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 NFATC2Q13469 925 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 GALNT3Q14435 633 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 MESDQ14696 234 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 ZNF569Q5MCW4 686 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 SNAP47Q5SQN1 464 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.59□□□□□ -0.87
CHD4-207ENST00000537634 DCAF12Q5T6F0 453 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 WDR74Q6RFH5 385 aaPredicted RBP9.59□□□□□ -0.87
CHD4-207ENST00000537634 LYSMD3Q7Z3D4 306 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 SLC9B2Q86UD5 537 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 PHYKPLQ8IUZ5 450 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 AVL9Q8NBF6 648 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 RAPGEF5Q92565 580 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 NKD1Q969G9 470 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 PMEPA1Q969W9 287 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 WDR24Q96S15 920 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 ANP32EQ9BTT0 268 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 SPATA16Q9BXB7 569 aa9.59□□□□□ -0.87
CHD4-207ENST00000537634 XPO4Q9C0E2 1151 aaKnown RBP9.59□□□□□ -0.87
CHD4-207ENST00000537634 SARS2Q9NP81 518 aaKnown RBP9.59□□□□□ -0.87
CHD4-207ENST00000537634 ZNHIT6Q9NWK9 470 aaKnown RBP9.59□□□□□ -0.87
CHD4-207ENST00000537634 TBC1D29Q9UFV1 150 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms