RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ZNF140P52738 457 aaPredicted RBP15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 SETMARQ53H47 684 aaPredicted RBP15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 FAM171A1Q5VUB5 890 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 KRT80Q6KB66 452 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 NKAPQ8N5F7 415 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 OLAHQ9NV23 265 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 FAM50BQ9Y247 325 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 VPS9D1Q9Y2B5 631 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 MYRFQ9Y2G1 1151 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 GPR45Q9Y5Y3 372 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 MYOCOSA0A1B0GUC4 107 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 A0A1W2PP18 115 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 DHRS12A0PJE2 317 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 FXYD1O00168 92 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 STX16O14662 325 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 SOAT2O75908 522 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 PYGLP06737 847 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 ZDHHC11BP0C7U3 371 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 CST5P28325 142 aaPredicted RBP15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 FLT3LGP49771 235 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 GNA12Q03113 381 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 TAF1AQ15573 450 aaPredicted RBP15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 PABPC1LQ4VXU2 614 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 INTS11Q5TA45 600 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 LCN8Q6JVE9 175 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 AFTPHQ6ULP2 937 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 LGI2Q8N0V4 545 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 TFAP2CQ92754 450 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 SLC45A3Q96JT2 553 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 PFDN4Q9NQP4 134 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 DUS2Q9NX74 493 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 CMTM6Q9NX76 183 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 GIMAP2Q9UG22 337 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 GABRQQ9UN88 632 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 CHD5Q8TDI0 1954 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 C2orf81A6NN90 581 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 H3BNH8 94 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 TLR5O60602 858 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 CRCPO75575 148 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 CKBP12277 381 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 ZNF23P17027 643 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 HOXD9P28356 352 aaPredicted RBP15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 TRIM32Q13049 653 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 GPR17Q13304 367 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 CYTH1Q15438 398 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 TMEM259Q4ZIN3 620 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 TBCELQ5QJ74 424 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 TXNDC11Q6PKC3 985 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 EFL1Q7Z2Z2 1120 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 SPPL2CQ8IUH8 684 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 CFAP52Q8N1V2 620 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 TRIML2Q8N7C3 387 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 MFSD2AQ8NA29 543 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 OR4K2Q8NGD2 314 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 FUBP1Q96AE4 644 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 RMDN1Q96DB5 314 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 CCT7Q99832 543 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 TRIM54Q9BYV2 358 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 CCSER2Q9H7U1 834 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 RRAGCQ9HB90 399 aa15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 SEMA4BQ9NPR2 832 aaPredicted RBP15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 GMPR2Q9P2T1 348 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 OAS3Q9Y6K5 1087 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-202ENST00000535997 KLK8O60259 260 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 ECI2O75521 394 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 MLYCDO95822 493 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 ASLP04424 464 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 CYBBP04839 570 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 RPS17P08708 135 aaKnown RBP15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 PRR35P0CG20 571 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 PRSS56P0CW18 603 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 CD9P21926 228 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 CES1P23141 567 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 PSMA4P25789 261 aaKnown RBP15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 FCGRTP55899 365 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 ARPP19P56211 112 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 TUBA4AP68366 448 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 SMARCB1Q12824 385 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 TSNQ15631 228 aaKnown RBP15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 IL31Q6EBC2 164 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 NUSAP1Q9BXS6 441 aaKnown RBP15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 AURKCQ9UQB9 309 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 PCDHA9Q9Y5H5 950 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 SPO11Q9Y5K1 396 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 A0A1B0GTL3 188 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 TYW5A2RUC4 315 aaKnown RBP15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 SOCS2O14508 198 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 PFDN6O15212 129 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 INSIG1O15503 277 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 ESRRBO95718 433 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 CHEK2O96017 543 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 KCNQ1P51787 676 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 DIO3P55073 304 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 GLT6D1Q7Z4J2 308 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 HM13Q8TCT9 377 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 SEPT5Q99719 369 aaPredicted RBP15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 CINPQ9BW66 212 aaPredicted RBP15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 MUC13Q9H3R2 512 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 CLK4Q9HAZ1 481 aaKnown RBP15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 AGPAT4Q9NRZ5 378 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms