RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 ATP1A1P05023 1023 aaKnown RBP13.76□□□□□ -0.21
CCDC84-208ENST00000534656 PRKAR1AP10644 381 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 IL4RP24394 825 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 EPHA4P54764 986 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 DSC2Q02487 901 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 SLC25A11Q02978 314 aaKnown RBP13.76□□□□□ -0.21
CCDC84-208ENST00000534656 CDC20Q12834 499 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 NFATC2Q13469 925 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 UBAP2LQ14157 1087 aaKnown RBP13.76□□□□□ -0.21
CCDC84-208ENST00000534656 IHHQ14623 411 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 SLC9B2Q86UD5 537 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 UNC5BQ8IZJ1 945 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 NIPA2Q8N8Q9 360 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 C9orf43Q8TAL5 461 aaPredicted RBP13.76□□□□□ -0.21
CCDC84-208ENST00000534656 WDR24Q96S15 920 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 TRIT1Q9H3H1 467 aaKnown RBP13.76□□□□□ -0.21
CCDC84-208ENST00000534656 APMAPQ9HDC9 416 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 RCOR3Q9P2K3 495 aaPredicted RBP13.76□□□□□ -0.21
CCDC84-208ENST00000534656 ANKMY1Q9P2S6 941 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 CNOT6Q9ULM6 557 aaKnown RBP13.76□□□□□ -0.21
CCDC84-208ENST00000534656 CHKBQ9Y259 395 aa13.76□□□□□ -0.21
CCDC84-208ENST00000534656 OAS3Q9Y6K5 1087 aaKnown RBP13.76□□□□□ -0.21
CCDC84-208ENST00000534656 A6NCN8 305 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 MATN3O15232 486 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 STK17BO94768 372 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 PRLP01236 227 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 SKILP12757 684 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 SLC2A4P14672 509 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 GARSP41250 739 aaKnown RBP13.75□□□□□ -0.21
CCDC84-208ENST00000534656 ZNF165P49910 485 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 FOXK1P85037 733 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 MC1RQ01726 317 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 GALNT2Q10471 571 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 MMRN1Q13201 1228 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 KRT81Q14533 505 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 IGFBP7Q16270 282 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 LYSMD3Q7Z3D4 306 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 KDELC2Q7Z4H8 507 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCDC84-208ENST00000534656 APOBEC4Q8WW27 367 aaKnown RBP13.75□□□□□ -0.21
CCDC84-208ENST00000534656 MAML1Q92585 1016 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 LYSMD1Q96S90 227 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 HERPUD2Q9BSE4 406 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 TDRD1Q9BXT4 1180 aaKnown RBP13.75□□□□□ -0.21
CCDC84-208ENST00000534656 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.75□□□□□ -0.21
CCDC84-208ENST00000534656 RMI1Q9H9A7 625 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 ZNF71Q9NQZ8 489 aaPredicted RBP13.75□□□□□ -0.21
CCDC84-208ENST00000534656 AMACRQ9UHK6 382 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 KCNK6Q9Y257 313 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 COL12A1Q99715 3063 aa13.75□□□□□ -0.21
CCDC84-208ENST00000534656 TLN1Q9Y490 2541 aaKnown RBP13.74□□□□□ -0.21
CCDC84-208ENST00000534656 ZFC3H1O60293 1989 aaKnown RBP13.74□□□□□ -0.21
CCDC84-208ENST00000534656 KIR2DS5A0A0G2JLQ3 304 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 A0A0G2JNG1 304 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 KIR2DS3K7RE56 304 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 POLR1CO15160 346 aaPredicted RBP13.74□□□□□ -0.21
CCDC84-208ENST00000534656 MFSD11O43934 449 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 DLGAP3O95886 979 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 F3P13726 295 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 CA4P22748 312 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 CCNCP24863 283 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 OAS2P29728 719 aaKnown RBP13.74□□□□□ -0.21
CCDC84-208ENST00000534656 MAPK9P45984 424 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 SPINT3P49223 89 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 RPL26P61254 145 aaKnown RBP13.74□□□□□ -0.21
CCDC84-208ENST00000534656 KIR2DS5Q14953 304 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 PAFAH1B3Q15102 231 aaKnown RBP13.74□□□□□ -0.21
CCDC84-208ENST00000534656 DEFB109BQ30KR1 87 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 CRTC2Q53ET0 693 aaPredicted RBP13.74□□□□□ -0.21
CCDC84-208ENST00000534656 CCDC122Q5T0U0 273 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 HENMT1Q5T8I9 393 aaKnown RBP13.74□□□□□ -0.21
CCDC84-208ENST00000534656 TIGD7Q6NT04 549 aaPredicted RBP13.74□□□□□ -0.21
CCDC84-208ENST00000534656 ARRDC2Q8TBH0 407 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 FAM71BQ8TC56 605 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 STARD8Q92502 1023 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 FATE1Q969F0 183 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 ABHD17AQ96GS6 310 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 BTBD6Q96KE9 485 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 TBC1D10AQ9BXI6 508 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 EPB41L1Q9H4G0 881 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 FAM83DQ9H4H8 585 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 PCDH9Q9HC56 1237 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 HAUS2Q9NVX0 235 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 RBM22Q9NW64 420 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCDC84-208ENST00000534656 KLHL3Q9UH77 587 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 IP6K2Q9UHH9 426 aa13.74□□□□□ -0.21
CCDC84-208ENST00000534656 RPL26L1Q9UNX3 145 aaKnown RBP13.74□□□□□ -0.21
CCDC84-208ENST00000534656 C1orf232A0A0U1RR37 186 aa13.73□□□□□ -0.21
CCDC84-208ENST00000534656 OR5K4A6NMS3 321 aa13.73□□□□□ -0.21
CCDC84-208ENST00000534656 FADS2P1A8MWK0 482 aa13.73□□□□□ -0.21
CCDC84-208ENST00000534656 NUAK1O60285 661 aa13.73□□□□□ -0.21
CCDC84-208ENST00000534656 SNX2O60749 519 aa13.73□□□□□ -0.21
CCDC84-208ENST00000534656 CD48P09326 243 aa13.73□□□□□ -0.21
CCDC84-208ENST00000534656 ANKRD34CP0C6C1 535 aa13.73□□□□□ -0.21
CCDC84-208ENST00000534656 ACP5P13686 325 aa13.73□□□□□ -0.21
CCDC84-208ENST00000534656 TCN2P20062 427 aa13.73□□□□□ -0.21
CCDC84-208ENST00000534656 STAT5AP42229 794 aa13.73□□□□□ -0.21
CCDC84-208ENST00000534656 ARSEP51690 589 aa13.73□□□□□ -0.21
CCDC84-208ENST00000534656 NIPAL4Q0D2K0 466 aa13.73□□□□□ -0.21
CCDC84-208ENST00000534656 MAP7Q14244 749 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms