RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 TMPRSS11EQ9UL52 423 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 PKP3Q9Y446 797 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 PCDHGA1Q9Y5H4 931 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 SPEGQ15772 3267 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 C2orf81A6NN90 581 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 PGRMC1O00264 195 aaKnown RBP19.7■□□□□ 0.74
CPSF1-209ENST00000532725 DNAJC6O75061 913 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 SUN1O94901 812 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 TRIM16O95361 564 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 TOP3BO95985 862 aaKnown RBP19.7■□□□□ 0.74
CPSF1-209ENST00000532725 MYF5P13349 255 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 TPH1P17752 444 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 ACADVLP49748 655 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 SEMA5AQ13591 1074 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 TCEA2Q15560 299 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 CYP1B1Q16678 543 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 PYCR3Q53H96 274 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 C6orf132Q5T0Z8 1188 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 PAPD7Q5XG87 772 aaKnown RBP19.7■□□□□ 0.74
CPSF1-209ENST00000532725 ZCCHC8Q6NZY4 707 aaKnown RBP19.7■□□□□ 0.74
CPSF1-209ENST00000532725 TTC27Q6P3X3 843 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 RAB44Q7Z6P3 723 aaPredicted RBP19.7■□□□□ 0.74
CPSF1-209ENST00000532725 LINC00523Q86TU6 105 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 GKN2Q86XP6 184 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 CCL4L1Q8NHW4 92 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 MAGOHBQ96A72 148 aaKnown RBP19.7■□□□□ 0.74
CPSF1-209ENST00000532725 TRIM39Q9HCM9 518 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 RAB6BQ9NRW1 208 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 VPS18Q9P253 973 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 ST14Q9Y5Y6 855 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 LRP4O75096 1905 aa19.7■□□□□ 0.74
CPSF1-209ENST00000532725 GAPDHSO14556 408 aaPredicted RBP19.69■□□□□ 0.74
CPSF1-209ENST00000532725 STX7O15400 261 aaKnown RBP19.69■□□□□ 0.74
CPSF1-209ENST00000532725 LDB2O43679 373 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 SLC25A14O95258 325 aaPredicted RBP19.69■□□□□ 0.74
CPSF1-209ENST00000532725 ASMTLO95671 621 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 CRTAMO95727 393 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 SPAM1P38567 509 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 ADCY8P40145 1251 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 GNPDA1P46926 289 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 CHRNA6Q15825 494 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 ATP13A5Q4VNC0 1218 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 OGFOD3Q6PK18 319 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 C4orf22Q6V702 233 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 GSTA5Q7RTV2 222 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 TAF8Q7Z7C8 310 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 NRROSQ86YC3 692 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 CHCHD4Q8N4Q1 142 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 OR4K2Q8NGD2 314 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 SCG3Q8WXD2 468 aaKnown RBP19.69■□□□□ 0.74
CPSF1-209ENST00000532725 GLYATL1Q969I3 302 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 C19orf43Q9BQ61 176 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 DOLKQ9UPQ8 538 aa19.69■□□□□ 0.74
CPSF1-209ENST00000532725 PCYT1BQ9Y5K3 369 aaPredicted RBP19.69■□□□□ 0.74
CPSF1-209ENST00000532725 UGT1A9O60656 530 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 TCP1P17987 556 aaKnown RBP19.68■□□□□ 0.74
CPSF1-209ENST00000532725 UGT1A6P19224 532 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 UGT1A1P22309 533 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 UGT1A4P22310 534 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 UGT1A3P35503 534 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 UGT1A5P35504 534 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 COILP38432 576 aaPredicted RBP19.68■□□□□ 0.74
CPSF1-209ENST00000532725 GRIA1P42261 906 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 PDE1BQ01064 536 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 FOXC1Q12948 553 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 ILKQ13418 452 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 ZNF648Q5T619 568 aaPredicted RBP19.68■□□□□ 0.74
CPSF1-209ENST00000532725 MARK2Q7KZI7 788 aaKnown RBP19.68■□□□□ 0.74
CPSF1-209ENST00000532725 OR52K1Q8NGK4 314 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 VPS35Q96QK1 796 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 UGT1A7Q9HAW7 530 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 UGT1A10Q9HAW8 530 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 UGT1A8Q9HAW9 530 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 ARFGAP3Q9NP61 516 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 PIH1D1Q9NWS0 290 aaKnown RBP19.68■□□□□ 0.74
CPSF1-209ENST00000532725 ATXN10Q9UBB4 475 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 PLEKHM1Q9Y4G2 1056 aa19.68■□□□□ 0.74
CPSF1-209ENST00000532725 KNTC1P50748 2209 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 GLYATL1P3A0A0U1RQE8 302 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 FANCGO15287 622 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 NUAK1O60285 661 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 CA5AP35218 305 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 DUSP3P51452 185 aaPredicted RBP19.67■□□□□ 0.74
CPSF1-209ENST00000532725 ZNF140P52738 457 aaPredicted RBP19.67■□□□□ 0.74
CPSF1-209ENST00000532725 SHC2P98077 582 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 DAB2P98082 770 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 CTBSQ01459 385 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 KCTD19Q17RG1 926 aaPredicted RBP19.67■□□□□ 0.74
CPSF1-209ENST00000532725 FAM151BQ6UXP7 276 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 ADGRG6Q86SQ4 1221 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 SLC35F3Q8IY50 421 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 FAM46DQ8NEK8 389 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 OR13C4Q8NGS5 318 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 NAPGQ99747 312 aaPredicted RBP19.67■□□□□ 0.74
CPSF1-209ENST00000532725 OR2AG1Q9H205 316 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 SUDS3Q9H7L9 328 aaPredicted RBP19.67■□□□□ 0.74
CPSF1-209ENST00000532725 RMI1Q9H9A7 625 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 NCKIPSDQ9NZQ3 722 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 ZNHIT2Q9UHR6 403 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 GPR34Q9UPC5 381 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms