RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 LRRD1A4D1F6 860 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 RGSL1A5PLK6 1076 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 ANKRD66B4E2M5 251 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.69■□□□□ 0.26
CPSF1-207ENST00000531727 ATP1A1P05023 1023 aaKnown RBP16.69■□□□□ 0.26
CPSF1-207ENST00000531727 CSF2RBP32927 897 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 GPLD1P80108 840 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 ZBTB17Q13105 803 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 MANEAQ5SRI9 462 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 VSIG1Q86XK7 387 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 SFRP1Q8N474 314 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 SLC35G2Q8TBE7 412 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 CCHCR1Q8TD31 782 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 ADGRE3Q9BY15 652 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 RMI1Q9H9A7 625 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 ZNHIT6Q9NWK9 470 aaKnown RBP16.69■□□□□ 0.26
CPSF1-207ENST00000531727 PKD2L2Q9NZM6 624 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 HEY1Q9Y5J3 304 aa16.69■□□□□ 0.26
CPSF1-207ENST00000531727 PCYT1BQ9Y5K3 369 aaPredicted RBP16.69■□□□□ 0.26
CPSF1-207ENST00000531727 TRBV23OR9-2A0A075B6M9 112 aa16.68■□□□□ 0.26
CPSF1-207ENST00000531727 C3orf70A6NLC5 250 aaPredicted RBP16.68■□□□□ 0.26
CPSF1-207ENST00000531727 FADS2P1A8MWK0 482 aa16.68■□□□□ 0.26
CPSF1-207ENST00000531727 CBFA2T2O43439 604 aa16.68■□□□□ 0.26
CPSF1-207ENST00000531727 AKR1B10O60218 316 aa16.68■□□□□ 0.26
CPSF1-207ENST00000531727 EML2O95834 649 aa16.68■□□□□ 0.26
CPSF1-207ENST00000531727 FGF3P11487 239 aaPredicted RBP16.68■□□□□ 0.26
CPSF1-207ENST00000531727 PTMSP20962 102 aa16.68■□□□□ 0.26
CPSF1-207ENST00000531727 ARHGAP25P42331 645 aa16.68■□□□□ 0.26
CPSF1-207ENST00000531727 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.68■□□□□ 0.26
CPSF1-207ENST00000531727 SLC9A4Q6AI14 798 aa16.68■□□□□ 0.26
CPSF1-207ENST00000531727 CHST15Q7LFX5 561 aaPredicted RBP16.68■□□□□ 0.26
CPSF1-207ENST00000531727 LYSMD3Q7Z3D4 306 aa16.68■□□□□ 0.26
CPSF1-207ENST00000531727 VASH2Q86V25 355 aa16.68■□□□□ 0.26
CPSF1-207ENST00000531727 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.68■□□□□ 0.26
CPSF1-207ENST00000531727 PRKAB1Q9Y478 270 aa16.68■□□□□ 0.26
CPSF1-207ENST00000531727 STMND1H3BQB6 276 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 APOL1O14791 398 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 MTA2O94776 668 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 THRAP10827 490 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 AP1B1Q10567 949 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 GALNT3Q14435 633 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 TMEM71Q6P5X7 295 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 ZNF761Q86XN6 746 aaPredicted RBP16.67■□□□□ 0.26
CPSF1-207ENST00000531727 RHOT2Q8IXI1 618 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 AGBL5Q8NDL9 886 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 CCDC112Q8NEF3 446 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 AHCYL2Q96HN2 611 aaKnown RBP16.67■□□□□ 0.26
CPSF1-207ENST00000531727 TAAR9Q96RI9 348 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 TRIB3Q96RU7 358 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 SLC38A3Q99624 504 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 MAK16Q9BXY0 300 aaKnown RBP16.67■□□□□ 0.26
CPSF1-207ENST00000531727 ABHD10Q9NUJ1 306 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 TMEM9Q9P0T7 183 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 TBC1D29Q9UFV1 150 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 PCDHGA4Q9Y5G9 962 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 PCDHGA3Q9Y5H0 932 aa16.67■□□□□ 0.26
CPSF1-207ENST00000531727 B8ZZF3 427 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 DUX1O43812 170 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 ITGB2P05107 769 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 TPM1P09493 284 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 MPSTP25325 297 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 CSTF2P33240 577 aaKnown RBP eCLIP16.66■□□□□ 0.26
CPSF1-207ENST00000531727 ARSDP51689 593 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 HHEXQ03014 270 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 PDK1Q15118 436 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 OR10G6Q8NH81 332 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 PMEPA1Q969W9 287 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 EID2BQ96D98 161 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 IMP4Q96G21 291 aaKnown RBP16.66■□□□□ 0.26
CPSF1-207ENST00000531727 OLFM3Q96PB7 478 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 CHP1Q99653 195 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 DDA1Q9BW61 102 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 CEP41Q9BYV8 373 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 ZMYND15Q9H091 742 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 SLC25A51Q9H1U9 297 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 CARD9Q9H257 536 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 STN1Q9H668 368 aaKnown RBP16.66■□□□□ 0.26
CPSF1-207ENST00000531727 ZFYVE1Q9HBF4 777 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 SARS2Q9NP81 518 aaKnown RBP16.66■□□□□ 0.26
CPSF1-207ENST00000531727 SPTLC3Q9NUV7 552 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 PDP2Q9P2J9 529 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 KCNK6Q9Y257 313 aa16.66■□□□□ 0.26
CPSF1-207ENST00000531727 J3QKU1 62 aa16.65■□□□□ 0.26
CPSF1-207ENST00000531727 PPP1R12AO14974 1030 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-207ENST00000531727 NUAK1O60285 661 aa16.65■□□□□ 0.26
CPSF1-207ENST00000531727 ZIC2O95409 532 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-207ENST00000531727 KRT1P04264 644 aa16.65■□□□□ 0.26
CPSF1-207ENST00000531727 ACP5P13686 325 aa16.65■□□□□ 0.26
CPSF1-207ENST00000531727 SLC2A4P14672 509 aa16.65■□□□□ 0.26
CPSF1-207ENST00000531727 ZFXP17010 805 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-207ENST00000531727 WT1P19544 449 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-207ENST00000531727 DCDC1P59894 354 aa16.65■□□□□ 0.26
CPSF1-207ENST00000531727 SLC14A2Q15849 920 aa16.65■□□□□ 0.26
CPSF1-207ENST00000531727 LINC00303Q3SY05 128 aa16.65■□□□□ 0.26
CPSF1-207ENST00000531727 LRRC38Q5VT99 294 aa16.65■□□□□ 0.26
CPSF1-207ENST00000531727 IYDQ6PHW0 289 aa16.65■□□□□ 0.26
CPSF1-207ENST00000531727 XKR5Q6UX68 686 aa16.65■□□□□ 0.26
CPSF1-207ENST00000531727 NPNTQ6UXI9 565 aa16.65■□□□□ 0.26
CPSF1-207ENST00000531727 NT5DC3Q86UY8 548 aa16.65■□□□□ 0.26
CPSF1-207ENST00000531727 RFX6Q8HWS3 928 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms