RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 TSHRP16473 764 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 FOXN2P32314 431 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 CNR2P34972 360 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 CA5AP35218 305 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 IGFALSP35858 605 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 NUBP1P53384 320 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 SLC29A2Q14542 456 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 STAT4Q14765 748 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 ZNF470Q6ECI4 717 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 MRNIPQ6NTE8 343 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 PRR23BQ6ZRT6 265 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 CTAGE3PQ8IX95 158 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 ZBTB44Q8NCP5 570 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.53■□□□□ 0.41e-6■■■■■ 31.4
CTSB-222ENST00000531551 MRRFQ96E11 262 aaKnown RBP17.53■□□□□ 0.4
CTSB-222ENST00000531551 AASDHPPTQ9NRN7 309 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 MOCS1Q9NZB8 636 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 ZFATQ9P243 1243 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 DMTF1Q9Y222 760 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 OR1A2Q9Y585 309 aa17.53■□□□□ 0.4
CTSB-222ENST00000531551 POM121BA6NF01 834 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 H0Y8X5 98 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 SOD1P00441 154 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 CD27P26842 260 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 PMLP29590 882 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 HSD17B3P37058 310 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 MGAT5Q09328 741 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 CTBP1Q13363 440 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 SIM2Q14190 667 aaPredicted RBP17.52■□□□□ 0.4
CTSB-222ENST00000531551 PLK5Q496M5 336 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 SDCCAG8Q86SQ7 713 aaPredicted RBP17.52■□□□□ 0.4
CTSB-222ENST00000531551 NLRP8Q86W28 1048 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 HEATR4Q86WZ0 1026 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 DENND6AQ8IWF6 608 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 PIANPQ8IYJ0 282 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 DENND6BQ8NEG7 585 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 CDKL2Q92772 493 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 SLC6A18Q96N87 628 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 PCDHGA2Q9Y5H1 932 aa17.52■□□□□ 0.4
CTSB-222ENST00000531551 A0A087WUV0 522 aaPredicted RBP17.52■□□□□ 0.39
CTSB-222ENST00000531551 C10orf142B7Z368 130 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 SLC25A14O95258 325 aaPredicted RBP17.52■□□□□ 0.39
CTSB-222ENST00000531551 PYGLP06737 847 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 NUDT1P36639 197 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 SEMA3AQ14563 771 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 KBTBD12Q3ZCT8 623 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 GPR33Q49SQ1 333 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 WDR45BQ5MNZ6 344 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 PMS2CLQ68D20 193 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 TRIM74Q86UV6 250 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 SERPINA9Q86WD7 417 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 GABPB2Q8TAK5 448 aaPredicted RBP17.52■□□□□ 0.39
CTSB-222ENST00000531551 CALML6Q8TD86 181 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 GLYATL1Q969I3 302 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 FAM167BQ9BTA0 163 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 WDR26Q9H7D7 661 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 SLCO1B1Q9Y6L6 691 aa17.52■□□□□ 0.39
CTSB-222ENST00000531551 TRPM6Q9BX84 2022 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 ATXN2Q99700 1313 aaKnown RBP17.51■□□□□ 0.39
CTSB-222ENST00000531551 MTX2O75431 263 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 EFTUD2Q15029 972 aaKnown RBP eCLIP17.51■□□□□ 0.396e-10■■■■□ 23.5
CTSB-222ENST00000531551 UAP1Q16222 522 aaPredicted RBP17.51■□□□□ 0.39
CTSB-222ENST00000531551 ZNF648Q5T619 568 aaPredicted RBP17.51■□□□□ 0.39
CTSB-222ENST00000531551 TEDDM1Q5T9Z0 273 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 LYSMD4Q5XG99 296 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 GCNT7Q6ZNI0 430 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 PPM1NQ8N819 430 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 BTN2A2Q8WVV5 523 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 ULK4Q96C45 1275 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 BMFQ96LC9 184 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 TTC1Q99614 292 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 EPB41L4BQ9H329 900 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 SMYD2Q9NRG4 433 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 RABGEF1Q9UJ41 708 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 TMPRSS11EQ9UL52 423 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 R4GN57 208 aa17.51■□□□□ 0.39
CTSB-222ENST00000531551 CXorf49A8MYA2 514 aaPredicted RBP17.5■□□□□ 0.39
CTSB-222ENST00000531551 RHOBTB1O94844 696 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 ITPKAP23677 461 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 AKT1P31749 480 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 SLC1A2P43004 574 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 CDK3Q00526 305 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 FRG1Q14331 258 aaKnown RBP17.5■□□□□ 0.39
CTSB-222ENST00000531551 LPAL2Q16609 132 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 AARS2Q5JTZ9 985 aaKnown RBP17.5■□□□□ 0.39
CTSB-222ENST00000531551 GPRC6AQ5T6X5 926 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 DOK6Q6PKX4 331 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 PHYKPLQ8IUZ5 450 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 NXPE1Q8N323 547 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 TMEM145Q8NBT3 493 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 DTX3LQ8TDB6 740 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 SGSM3Q96HU1 749 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 CYTH2Q99418 400 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 ORAI3Q9BRQ5 295 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 APOOQ9BUR5 198 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 LGR4Q9BXB1 951 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 FBXO6Q9NRD1 293 aaPredicted RBP17.5■□□□□ 0.39
CTSB-222ENST00000531551 KMT2EQ8IZD2 1858 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 NDUFS3O75489 264 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 ASMTLO95671 621 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms