RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 IVLP07476 585 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 PRKAR1AP10644 381 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 NR1D1P20393 614 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 F8A1P23610 371 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 VIPR1P32241 457 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 TSPAN7P41732 249 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 FASLGP48023 281 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 AIF1P55008 147 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 AP1S1P61966 158 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 UBXN1Q04323 297 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 IL10RBQ08334 325 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 CDC20Q12834 499 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 DPYSQ14117 519 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 ESPL1Q14674 2120 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 ERCC6LQ2NKX8 1250 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 DOK6Q6PKX4 331 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 ARHGAP22Q7Z5H3 698 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 TECPR1Q7Z6L1 1165 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 OR8K1Q8NGG5 319 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 C9orf43Q8TAL5 461 aaPredicted RBP9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 ERGIC2Q96RQ1 377 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 MCCC1Q96RQ3 725 aaPredicted RBP9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 CARD6Q9BX69 1037 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 DHX35Q9H5Z1 703 aaKnown RBP9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 PHPT1Q9NRX4 125 aaPredicted RBP9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 ETNK2Q9NVF9 386 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 CD84Q9UIB8 345 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 CAPN11Q9UMQ6 739 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 TMEM98Q9Y2Y6 226 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 MRPS18BQ9Y676 258 aaKnown RBP9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 SPTBP11277 2137 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 TRBV23OR9-2A0A075B6M9 112 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 A6NCN8 305 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 ZNF891A8MT65 544 aaPredicted RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 PDE2AO00408 941 aaPredicted RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 SOCS5O75159 536 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 DLGAP3O95886 979 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 CPP00450 1065 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 TUBBP07437 444 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 PDHA1P08559 390 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 FURINP09958 794 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 TCF4P15884 667 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 TEAD1P28347 426 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 CSTF2P33240 577 aaKnown RBP eCLIP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 HTR7P34969 479 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 ACTR1BP42025 376 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 ACTR1AP61163 376 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 MAXP61244 160 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 POLR2LP62875 67 aaKnown RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 MAMLD1Q13495 774 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 LBRQ14739 615 aaKnown RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 WHAMMP3Q1A5X7 153 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 KRTAP21-3Q3LHN1 58 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 PYCR3Q53H96 274 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 FKBP15Q5T1M5 1219 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 DCAF12Q5T6F0 453 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 ZNF787Q6DD87 383 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 TMEM71Q6P5X7 295 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 TMCO3Q6UWJ1 677 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 FAM129CQ86XR2 697 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 SRRM1Q8IYB3 904 aaKnown RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 CCDC170Q8IYT3 715 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 MCOLN2Q8IZK6 566 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 SFRP1Q8N474 314 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 PDCD6IPQ8WUM4 868 aaKnown RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 PIH1D2Q8WWB5 315 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 SCAMP4Q969E2 229 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 MIB2Q96AX9 1013 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 NAPGQ99747 312 aaPredicted RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 AGPAT1Q99943 283 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 ASPSCR1Q9BZE9 553 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 ABCG8Q9H221 673 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 HAUS4Q9H6D7 363 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 GPN2Q9H9Y4 310 aaPredicted RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 SP110Q9HB58 689 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 NOD2Q9HC29 1040 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 ZNHIT6Q9NWK9 470 aaKnown RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 SIDT1Q9NXL6 827 aaKnown RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 CWC15Q9P013 229 aaKnown RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 AKAP7Q9P0M2 348 aaPredicted RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 PCSK1NQ9UHG2 260 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 CDC23Q9UJX2 597 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 ANAPC2Q9UJX6 822 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 LUC7L2Q9Y383 392 aaKnown RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 TMEM184BQ9Y519 407 aaPredicted RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 V9GYY5 206 aaPredicted RBP9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 FER1L5A0AVI2 2057 aa9.14□□□□□ -0.95
CHMP4A-205ENST00000531158 PCSK5Q92824 1860 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 CTAGE9A4FU28 777 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 A8MU76 341 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 MTSS1O43312 755 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 FZD6O60353 706 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 MAFKO60675 156 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 DNAJC6O75061 913 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 LRCH4O75427 683 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 NDUFA10O95299 355 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 PGLSO95336 258 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 MAP3K6O95382 1288 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms