RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 PRKRIP1Q9H875 184 aaPredicted RBP2.86□□□□□ -1.95
NUP98-218ENST00000530516 SLC28A3Q9HAS3 691 aa2.86□□□□□ -1.95
NUP98-218ENST00000530516 ZNF334Q9HCZ1 680 aaPredicted RBP2.86□□□□□ -1.95
NUP98-218ENST00000530516 HCFC1R1Q9NWW0 138 aa2.86□□□□□ -1.95
NUP98-218ENST00000530516 TAS2R10Q9NYW0 307 aa2.86□□□□□ -1.95
NUP98-218ENST00000530516 C9orf78Q9NZ63 289 aaPredicted RBP2.86□□□□□ -1.95
NUP98-218ENST00000530516 TAAR2Q9P1P5 351 aa2.86□□□□□ -1.95
NUP98-218ENST00000530516 CNOT8Q9UFF9 292 aaKnown RBP2.86□□□□□ -1.95
NUP98-218ENST00000530516 POU2F3Q9UKI9 436 aa2.86□□□□□ -1.95
NUP98-218ENST00000530516 PTPRCP08575 1304 aa2.86□□□□□ -1.95
NUP98-218ENST00000530516 A0A1W2PP11 408 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 C5orf60A6NFR6 353 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 TTC36A6NLP5 189 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 FAM90A26D6RGX4 464 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 FGF17O60258 216 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 AMBPP02760 352 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 ATP1A1P05023 1023 aaKnown RBP2.85□□□□□ -1.95
NUP98-218ENST00000530516 GNL1P36915 607 aaPredicted RBP2.85□□□□□ -1.95
NUP98-218ENST00000530516 PBX3P40426 434 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 UBA7P41226 1012 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 FMO5P49326 533 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 CRIP2P52943 208 aaPredicted RBP2.85□□□□□ -1.95
NUP98-218ENST00000530516 F2RL1P55085 397 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 CASP6P55212 293 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 CLDN20P56880 219 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 ERVK11-1P61568 191 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 OLR1P78380 273 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 PHEXP78562 749 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 CEBPZQ03701 1054 aaKnown RBP2.85□□□□□ -1.95
NUP98-218ENST00000530516 FOXM1Q08050 763 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 FOXD4Q12950 439 aaPredicted RBP2.85□□□□□ -1.95
NUP98-218ENST00000530516 GTF2H2Q13888 395 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 PLA2G4FQ68DD2 849 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 C18orf63Q68DL7 685 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 LCN10Q6JVE6 187 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 GTF2H2CQ6P1K8 395 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 TSSK4Q6SA08 328 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 ZNF852Q6ZMS4 543 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 CACNA2D4Q7Z3S7 1137 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 R3HCC1LQ7Z5L2 792 aaKnown RBP2.85□□□□□ -1.95
NUP98-218ENST00000530516 EPHX4Q8IUS5 362 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 DMBX1Q8NFW5 382 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 KCNG4Q8TDN1 519 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 SLC44A1Q8WWI5 657 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 INTS12Q96CB8 462 aaKnown RBP2.85□□□□□ -1.95
NUP98-218ENST00000530516 ZNF583Q96ND8 569 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 PCGF1Q9BSM1 259 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 LRRC1Q9BTT6 524 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 PREBQ9HCU5 417 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 GAB2Q9UQC2 676 aa2.85□□□□□ -1.95
NUP98-218ENST00000530516 GREB1LQ9C091 1923 aaPredicted RBP2.84□□□□□ -1.95
NUP98-218ENST00000530516 C1orf226A1L170 272 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 FAM72CH0Y354 149 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 M0QZ24 198 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 WDR1O75083 606 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 SEC14L2O76054 403 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 WISP2O76076 250 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 LDLRP01130 860 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 ZNF182P17025 639 aaPredicted RBP2.84□□□□□ -1.95
NUP98-218ENST00000530516 UGT1A1P22309 533 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 HOXC9P31274 260 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 IL15P40933 162 aaPredicted RBP2.84□□□□□ -1.95
NUP98-218ENST00000530516 GRIK2Q13002 908 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 KRTCAP3Q53RY4 240 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 DCST1Q5T197 706 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 FAM72AQ5TYM5 149 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 FAM72DQ6L9T8 149 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 FAM171BQ6P995 826 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 KCTD8Q6ZWB6 473 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 SLC26A9Q7LBE3 791 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 TRMT1LQ7Z2T5 733 aaKnown RBP2.84□□□□□ -1.95
NUP98-218ENST00000530516 FAM72BQ86X60 149 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 EXOC8Q8IYI6 725 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 TMEM116Q8NCL8 245 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 KLHDC9Q8NEP7 349 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 CTCFLQ8NI51 663 aaPredicted RBP2.84□□□□□ -1.95
NUP98-218ENST00000530516 ZNF501Q96CX3 271 aaPredicted RBP2.84□□□□□ -1.95
NUP98-218ENST00000530516 FBXO17Q96EF6 278 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 NEUROD6Q96NK8 337 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 WDFY2Q96P53 400 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 QRFPRQ96P65 431 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 PSMD1Q99460 953 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 POLR1BQ9H9Y6 1135 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 GTF2A1LQ9UNN4 478 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 TCF19Q9Y242 345 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 KLHL20Q9Y2M5 609 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 CLIC4Q9Y696 253 aa2.84□□□□□ -1.95
NUP98-218ENST00000530516 SNED1Q8TER0 1413 aa2.84□□□□□ -1.96
NUP98-218ENST00000530516 ZCWPW2A0A1B0GU75 182 aa2.83□□□□□ -1.96
NUP98-218ENST00000530516 A0A1W2PPH5 198 aa2.83□□□□□ -1.96
NUP98-218ENST00000530516 A0A1W2PRG0 241 aa2.83□□□□□ -1.96
NUP98-218ENST00000530516 ANKRD28O15084 1053 aa2.83□□□□□ -1.96
NUP98-218ENST00000530516 ZNHIT1O43257 154 aa2.83□□□□□ -1.96
NUP98-218ENST00000530516 EDIL3O43854 480 aa2.83□□□□□ -1.96
NUP98-218ENST00000530516 KCNK5O95279 499 aa2.83□□□□□ -1.96
NUP98-218ENST00000530516 MLYCDO95822 493 aa2.83□□□□□ -1.96
NUP98-218ENST00000530516 FAM106CPP0CH98 169 aa2.83□□□□□ -1.96
NUP98-218ENST00000530516 KRT5P13647 590 aa2.83□□□□□ -1.96
NUP98-218ENST00000530516 UBA1P22314 1058 aaKnown RBP2.83□□□□□ -1.96
NUP98-218ENST00000530516 RARSP54136 660 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms