RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 MAST3O60307 1309 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 CPED1A4D0V7 1026 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 H7C1Q1 480 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 PLSCR1O15162 318 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 VEGFDO43915 354 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 CREG1O75629 220 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 GH2P01242 217 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 ICAM1P05362 532 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 VPREB1P12018 145 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 TYMPP19971 482 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 BMP5P22003 454 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 NR2F2P24468 414 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 HOXA7P31268 230 aaPredicted RBP3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 SNU13P55769 128 aaKnown RBP3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 PPATQ06203 517 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 MZT1Q08AG7 82 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 SREBF2Q12772 1141 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 KRT33BQ14525 404 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 RPS6KA1Q15418 735 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 TAF7Q15545 349 aaPredicted RBP3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 PNLIPRP3Q17RR3 467 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 MYLK3Q32MK0 819 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 KBTBD12Q3ZCT8 623 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 SHEQ5VZ18 495 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 HEPHL1Q6MZM0 1159 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 TRIM72Q6ZMU5 477 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 PQLC2Q6ZP29 291 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 C11orf57Q6ZUT1 292 aaPredicted RBP3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 INTS8Q75QN2 995 aaKnown RBP3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 DPPA4Q7L190 304 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 CYB5R4Q7L1T6 521 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 SLC29A4Q7RTT9 530 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 ZNF595Q8IYB9 648 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 SFRP1Q8N474 314 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 FBXO39Q8N4B4 442 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 PARP16Q8N5Y8 322 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 KDM1BQ8NB78 822 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 SLC4A11Q8NBS3 891 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 OR7G3Q8NG95 312 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 C9orf43Q8TAL5 461 aaPredicted RBP3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 ROBO4Q8WZ75 1007 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 DNASE1L2Q92874 299 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 TEKT1Q969V4 418 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 NXNL1Q96CM4 212 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 C16orf45Q96MC5 204 aaPredicted RBP3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 NLRP4Q96MN2 994 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 SLC38A3Q99624 504 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 PCGF1Q9BSM1 259 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 PIGMQ9H3S5 423 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 FZD8Q9H461 694 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 MAGIXQ9H6Y5 334 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 MVB12BQ9H7P6 319 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 PARPBPQ9NWS1 579 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 ANKRD10Q9NXR5 420 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 CYP39A1Q9NYL5 469 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 ERAP1Q9NZ08 941 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 VPS18Q9P253 973 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 PLEKHB1Q9UF11 243 aaPredicted RBP3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 FETUBQ9UGM5 382 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 TBK1Q9UHD2 729 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 IPO11Q9UI26 975 aaKnown RBP3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 SH3BGRL2Q9UJC5 107 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 SNX7Q9UNH6 387 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 ST3GAL5Q9UNP4 418 aa3.55□□□□□ -1.84
AMBRA1-208ENST00000529558 TMEM202A6NGA9 273 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 C5orf52A6NGY3 159 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 TRIM64CA6NLI5 447 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 FAM86B1E9PN63 330 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 PPP6CO00743 305 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 VCYO14598 125 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 HMMRO75330 724 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 TOMM70O94826 608 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 DDHD2O94830 711 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 TOP3BO95985 862 aaKnown RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 WNT1P04628 370 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 VIMP08670 466 aaKnown RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 FAM86B2P0C5J1 330 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 UROSP10746 265 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 UNGP13051 313 aaPredicted RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 TAL1P17542 331 aaPredicted RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 SCP2P22307 547 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 TACR3P29371 465 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 HOXC9P31274 260 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 SOAT1P35610 550 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 SLC16A2P36021 539 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 RAP1GAPP47736 663 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 KCNJ1P48048 391 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 GPC3P51654 580 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 TPD52P55327 224 aaPredicted RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 NME5P56597 212 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 ST8SIA6P61647 398 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 BLOC1S1P78537 153 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 ICAM4Q14773 271 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 ARHGEF6Q15052 776 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 SMN1Q16637 294 aaKnown RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 FAM98BQ52LJ0 330 aaKnown RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 KLHL26Q53HC5 615 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 TOR1AIP1Q5JTV8 583 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 KCNT1Q5JUK3 1230 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 NCAPH2Q6IBW4 605 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms