RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 FKBPLQ9UIM3 349 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 TRMT6Q9UJA5 497 aaKnown RBP15.26■□□□□ 0.03
USH1C-207ENST00000527720 ANKRD12Q6UB98 2062 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 ATP6AP2A0A1C7CYW4 349 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 PIP5K1BO14986 540 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 DENRO43583 198 aaKnown RBP15.26■□□□□ 0.03
USH1C-207ENST00000527720 ECI2O75521 394 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 ATP6AP2O75787 350 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 IRF1P10914 325 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 ARSAP15289 507 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 LBPP18428 481 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 PTGER3P43115 390 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 MRPL19P49406 292 aaKnown RBP15.26■□□□□ 0.03
USH1C-207ENST00000527720 PLD1Q13393 1074 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 PABPC1LQ4VXU2 614 aaKnown RBP15.26■□□□□ 0.03
USH1C-207ENST00000527720 PSAPL1Q6NUJ1 521 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 UGT3A1Q6NUS8 523 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 PRMT9Q6P2P2 845 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 SPATA24Q86W54 205 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 TICAM1Q8IUC6 712 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 FUNDC1Q8IVP5 155 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 MIER2Q8N344 545 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 TRPC4APQ8TEL6 797 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 DUS3LQ96G46 650 aaKnown RBP15.26■□□□□ 0.03
USH1C-207ENST00000527720 ZBED2Q9BTP6 218 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 PFDN4Q9NQP4 134 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 LHX3Q9UBR4 397 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 RAB26Q9ULW5 256 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 NDUFAF1Q9Y375 327 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 SCN8AQ9UQD0 1980 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 TYW5A2RUC4 315 aaKnown RBP15.25■□□□□ 0.03
USH1C-207ENST00000527720 C2orf78A6NCI8 922 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 H0Y626 953 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 MLYCDO95822 493 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 ESR1P03372 595 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 MSX2P35548 267 aaPredicted RBP15.25■□□□□ 0.03
USH1C-207ENST00000527720 HSPA13P48723 471 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 CLCN2P51788 898 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 IL2P60568 153 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 TSNQ15631 228 aaKnown RBP15.25■□□□□ 0.03
USH1C-207ENST00000527720 KIF19Q2TAC6 998 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 COQ5Q5HYK3 327 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 IRAK1BP1Q5VVH5 260 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 OGFOD2Q6N063 350 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 HJURPQ8NCD3 748 aaPredicted RBP15.25■□□□□ 0.03
USH1C-207ENST00000527720 ZNF483Q8TF39 744 aaPredicted RBP15.25■□□□□ 0.03
USH1C-207ENST00000527720 KLHL32Q96NJ5 620 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 NSUN5Q96P11 429 aaKnown RBP15.25■□□□□ 0.03
USH1C-207ENST00000527720 TUBGCP5Q96RT8 1024 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 HOPXQ9BPY8 73 aaPredicted RBP15.25■□□□□ 0.03
USH1C-207ENST00000527720 C19orf43Q9BQ61 176 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 HIPK3Q9H422 1215 aa15.25■□□□□ 0.03
USH1C-207ENST00000527720 FBRSL1Q9HCM7 1045 aaKnown RBP15.25■□□□□ 0.03
USH1C-207ENST00000527720 CNOT11Q9UKZ1 510 aaKnown RBP15.25■□□□□ 0.03
USH1C-207ENST00000527720 A0A0J9YYE9 177 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 LRRC14BA6NHZ5 514 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 FZD6O60353 706 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 PQBP1O60828 265 aaKnown RBP15.24■□□□□ 0.03
USH1C-207ENST00000527720 RHDQ02161 417 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 FOLH1Q04609 750 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 GRIK2Q13002 908 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 GRM2Q14416 872 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 CTSL3PQ5NE16 218 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 PIANPQ8IYJ0 282 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 TSPEARQ8WU66 669 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 COPS7BQ9H9Q2 264 aaPredicted RBP15.24■□□□□ 0.03
USH1C-207ENST00000527720 COL4A6Q14031 1691 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 CAPN8A6NHC0 703 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 GOLGA8CPA6NN73 597 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 BTN3A1O00481 513 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 PPP6CO00743 305 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 AP1G1O43747 822 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 TBL1XO60907 577 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 TSPAN12O95859 305 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 MBL2P11226 248 aaPredicted RBP15.24■□□□□ 0.03
USH1C-207ENST00000527720 IDO1P14902 403 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 HDCP19113 662 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 TCN1P20061 433 aaPredicted RBP15.24■□□□□ 0.03
USH1C-207ENST00000527720 CDKN1CP49918 316 aaPredicted RBP15.24■□□□□ 0.03
USH1C-207ENST00000527720 FOXA1P55317 472 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 ZRANB3Q5FWF4 1079 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 SPATA19Q7Z5L4 167 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 DDIASQ8IXT1 998 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 ST13P4Q8IZP2 240 aaPredicted RBP15.24■□□□□ 0.03
USH1C-207ENST00000527720 MARVELD2Q8N4S9 558 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 EFHBQ8N7U6 833 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 OR9I1Q8NGQ6 314 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 CD200R1Q8TD46 325 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 WBP2Q969T9 261 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 ZFRQ96KR1 1074 aaKnown RBP15.24■□□□□ 0.03
USH1C-207ENST00000527720 CCT7Q99832 543 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 FEM1AQ9BSK4 669 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 HERC2P3Q9BVR0 1158 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 TUBB1Q9H4B7 451 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 MAGEE1Q9HCI5 957 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 SDR39U1Q9NRG7 319 aaPredicted RBP15.24■□□□□ 0.03
USH1C-207ENST00000527720 PKP3Q9Y446 797 aa15.24■□□□□ 0.03
USH1C-207ENST00000527720 NPEPPSL1A6NEC2 478 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 CDC7O00311 574 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 SNAP91O60641 907 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms