RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 TCP10L2B9ZVM9 353 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 H0Y626 953 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 LINC01387J3KSC0 135 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 PDHXO00330 501 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 SLC16A3O15427 465 aaKnown RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 CLDN3O15551 220 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 TBX1O43435 398 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 PSTPIP1O43586 416 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 HYAL3O43820 417 aaPredicted RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 TADA2AO75478 443 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 CLN5O75503 358 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 CIAO1O76071 339 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 SLC22A5O76082 557 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 DDAH1O94760 285 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 CCNDBP1O95273 360 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 NPPAP01160 153 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 BPGMP07738 259 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 OR52Z1P0C646 297 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 HSMCR30P0CW71 290 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 CYP2A6P11509 494 aaPredicted RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 SELLP14151 372 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 TNNI3P19429 210 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 SLC9A1P19634 815 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 ZP3P21754 424 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 TGM2P21980 687 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 PSMA2P25787 234 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 YAP1P46937 504 aaKnown RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 ARCN1P48444 511 aaKnown RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 MEOX2P50222 304 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 BPIFB3P59826 476 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 DCDC1P59894 354 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 PRKCDQ05655 676 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 RGS1Q08116 209 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 LRRC74AQ0VAA2 488 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 FAPQ12884 760 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 HYAL2Q12891 473 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 PTP4A2Q12974 167 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 KCNC3Q14003 757 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 CAMK1Q14012 370 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 GCKRQ14397 625 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 CBX2Q14781 532 aaPredicted RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 POLD3Q15054 466 aaPredicted RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 ATP6AP1Q15904 470 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 AANATQ16613 207 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 CTF1Q16619 201 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 GPAT3Q53EU6 434 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 SETMARQ53H47 684 aaPredicted RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 Q5BKY6 102 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 ZMAT1Q5H9K5 638 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 MTX3Q5HYI7 312 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 C10orf62Q5T681 223 aaPredicted RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 HES5Q5TA89 166 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 TTC39BQ5VTQ0 682 aaPredicted RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 KRT39Q6A163 491 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 ZNF425Q6IV72 752 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 ZNF517Q6ZMY9 492 aaPredicted RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 SH2D5Q6ZV89 423 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 USP51Q70EK9 711 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 IKBIPQ70UQ0 350 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 GDPD3Q7L5L3 318 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 PIWIL3Q7Z3Z3 882 aaKnown RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 TMPRSS9Q7Z410 1059 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 SNX29P2Q8IUI4 249 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 MAP4K3Q8IVH8 894 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 TIGD4Q8IY51 512 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 TMEM130Q8N3G9 435 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 METTL4Q8N3J2 472 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 DHRSXQ8N5I4 330 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 TBC1D19Q8N5T2 526 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 DAGLBQ8NCG7 672 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 ZBTB44Q8NCP5 570 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 OR4D10Q8NGI6 311 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 OR13J1Q8NGT2 312 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 OR52N1Q8NH53 320 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 OLIG1Q8TAK6 271 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 DYNC2LI1Q8TCX1 351 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 XAGE3Q8WTP9 111 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 LRTOMTQ8WZ04 291 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 ST8SIA4Q92187 359 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 SLC7A6Q92536 515 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.79□□□□□ -1.48
CD44-225ENST00000527326 C18orf25Q96B23 403 aaPredicted RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 TMCO6Q96DC7 493 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 SHISA4Q96DD7 197 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 ZHX1-C8orf76Q96EF9 292 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 MSANTD3Q96H12 275 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 CNDP1Q96KN2 507 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 SPACA7Q96KW9 195 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 FOPNLQ96NB1 174 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 EYA3Q99504 573 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 EBF4Q9BQW3 602 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 BDH2Q9BUT1 245 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 CCDC32Q9BV29 185 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 PUS7LQ9H0K6 701 aaKnown RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 UPF3AQ9H1J1 476 aaKnown RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 PDZD7Q9H5P4 517 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 ARMT1Q9H993 441 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 COG4Q9H9E3 785 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 CAB39LQ9H9S4 337 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 SIX2Q9NPC8 291 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms