RNA–Protein interactions for RNA: ENST00000526866.5

CDC27-203, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-203ENST00000526866 MAP4P27816 1152 aaKnown RBP18.33■□□□□ 0.53
CDC27-203ENST00000526866 SLC25A11Q02978 314 aaKnown RBP18.33■□□□□ 0.53
CDC27-203ENST00000526866 MMRN1Q13201 1228 aa18.33■□□□□ 0.53
CDC27-203ENST00000526866 CEACAM20Q6UY09 585 aa18.33■□□□□ 0.53
CDC27-203ENST00000526866 KIAA1143Q96AT1 154 aaPredicted RBP18.33■□□□□ 0.53
CDC27-203ENST00000526866 WDR24Q96S15 920 aa18.33■□□□□ 0.53
CDC27-203ENST00000526866 TDRD1Q9BXT4 1180 aaKnown RBP18.33■□□□□ 0.53
CDC27-203ENST00000526866 VPS18Q9P253 973 aa18.33■□□□□ 0.53
CDC27-203ENST00000526866 CNOT6Q9ULM6 557 aaKnown RBP18.33■□□□□ 0.53
CDC27-203ENST00000526866 KCNK6Q9Y257 313 aa18.33■□□□□ 0.53
CDC27-203ENST00000526866 MFSD11O43934 449 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 PRLP01236 227 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 CD48P09326 243 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 MAPK9P45984 424 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 CDC20Q12834 499 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 PIGHQ14442 188 aaPredicted RBP18.32■□□□□ 0.52
CDC27-203ENST00000526866 KRT81Q14533 505 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 ALG1LQ6GMV1 187 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 IYDQ6PHW0 289 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 LRRC49Q8IUZ0 686 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 MAML1Q92585 1016 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 ZNF71Q9NQZ8 489 aaPredicted RBP18.32■□□□□ 0.52
CDC27-203ENST00000526866 FBXO8Q9NRD0 319 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 KLHL3Q9UH77 587 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 RELNP78509 3460 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 A6NCN8 305 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 STK17BO94768 372 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 ACP5P13686 325 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 OAS2P29728 719 aaKnown RBP18.32■□□□□ 0.52
CDC27-203ENST00000526866 GARSP41250 739 aaKnown RBP18.32■□□□□ 0.52
CDC27-203ENST00000526866 ABHD18Q0P651 414 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 GALNT2Q10471 571 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 IGFBP7Q16270 282 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 NIPA2Q8N8Q9 360 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 C9orf43Q8TAL5 461 aaPredicted RBP18.32■□□□□ 0.52
CDC27-203ENST00000526866 SH3KBP1Q96B97 665 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 ZPBPQ9BS86 351 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 STN1Q9H668 368 aaKnown RBP18.32■□□□□ 0.52
CDC27-203ENST00000526866 ANAPC2Q9UJX6 822 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 DNPEPQ9ULA0 475 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 TTLL3Q9Y4R7 772 aa18.32■□□□□ 0.52
CDC27-203ENST00000526866 TMEM184BQ9Y519 407 aaPredicted RBP18.32■□□□□ 0.52
CDC27-203ENST00000526866 FADS2P1A8MWK0 482 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 SNX2O60749 519 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 MAN1A1P33908 653 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 CASRP41180 1078 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 ZNF165P49910 485 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 EPHA4P54764 986 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 NCBP2-AS2Q69YL0 99 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 KDELC2Q7Z4H8 507 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 SLC9B2Q86UD5 537 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 RAVER1Q8IY67 606 aaKnown RBP18.31■□□□□ 0.52
CDC27-203ENST00000526866 LPCAT1Q8NF37 534 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 ARRDC2Q8TBH0 407 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 FAM71BQ8TC56 605 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 EFHD1Q9BUP0 239 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 TBC1D10AQ9BXI6 508 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 THAP2Q9H0W7 228 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 RBM22Q9NW64 420 aaKnown RBP eCLIP18.31■□□□□ 0.524e-7■■■■□ 23.3
CDC27-203ENST00000526866 RCOR3Q9P2K3 495 aaPredicted RBP18.31■□□□□ 0.52
CDC27-203ENST00000526866 ANKMY1Q9P2S6 941 aa18.31■□□□□ 0.52
CDC27-203ENST00000526866 FLNCQ14315 2725 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 MATN3O15232 486 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 DLGAP3O95886 979 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 F3P13726 295 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 CES1P23141 567 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 SPINT3P49223 89 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 FOXK1P85037 733 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 TYRO3Q06418 890 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 NIPAL4Q0D2K0 466 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 UBAP2LQ14157 1087 aaKnown RBP18.3■□□□□ 0.52
CDC27-203ENST00000526866 PAFAH1B3Q15102 231 aaKnown RBP18.3■□□□□ 0.52
CDC27-203ENST00000526866 DEFB109BQ30KR1 87 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 CCDC122Q5T0U0 273 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 HENMT1Q5T8I9 393 aaKnown RBP18.3■□□□□ 0.52
CDC27-203ENST00000526866 ATP1A1-AS1Q5TC04 95 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 LYSMD3Q7Z3D4 306 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 LRRN4Q8WUT4 740 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 STARD8Q92502 1023 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 LYSMD1Q96S90 227 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 HERPUD2Q9BSE4 406 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 RMI1Q9H9A7 625 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 PCDH9Q9HC56 1237 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 IP6K2Q9UHH9 426 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 ANAPC7Q9UJX3 599 aa18.3■□□□□ 0.52
CDC27-203ENST00000526866 C1orf232A0A0U1RR37 186 aa18.29■□□□□ 0.52
CDC27-203ENST00000526866 POLR1CO15160 346 aaPredicted RBP18.29■□□□□ 0.52
CDC27-203ENST00000526866 HLA-DQB2P05538 268 aa18.29■□□□□ 0.52
CDC27-203ENST00000526866 ARSEP51690 589 aa18.29■□□□□ 0.52
CDC27-203ENST00000526866 IFI16Q16666 785 aaKnown RBP18.29■□□□□ 0.52
CDC27-203ENST00000526866 FILIP1LQ4L180 1135 aa18.29■□□□□ 0.52
CDC27-203ENST00000526866 TIGD7Q6NT04 549 aaPredicted RBP18.29■□□□□ 0.52
CDC27-203ENST00000526866 C16orf46Q6P387 395 aa18.29■□□□□ 0.52
CDC27-203ENST00000526866 RNF31Q96EP0 1072 aa18.29■□□□□ 0.52
CDC27-203ENST00000526866 ABHD17AQ96GS6 310 aa18.29■□□□□ 0.52
CDC27-203ENST00000526866 NAP1L5Q96NT1 182 aaPredicted RBP18.29■□□□□ 0.52
CDC27-203ENST00000526866 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.29■□□□□ 0.52
CDC27-203ENST00000526866 TRIT1Q9H3H1 467 aaKnown RBP18.29■□□□□ 0.52
CDC27-203ENST00000526866 FAM83DQ9H4H8 585 aa18.29■□□□□ 0.52
CDC27-203ENST00000526866 CPNE7Q9UBL6 633 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms