RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 HERC6Q8IVU3 1022 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 CCAR1Q8IX12 1150 aaKnown RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 CCDC105Q8IYK2 499 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 VPS52Q8N1B4 723 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 MIGA1Q8NAN2 632 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 SPATA22Q8NHS9 363 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 RFWD2Q8NHY2 731 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 SCAMP5Q8TAC9 235 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 DEPTORQ8TB45 409 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 MORC4Q8TE76 937 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 PARD3BQ8TEW8 1205 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 HMGB4Q8WW32 186 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 SUSD6Q92537 303 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 RUBCNQ92622 972 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 ATOH1Q92858 354 aaPredicted RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 P2RX5Q93086 422 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 RMDN1Q96DB5 314 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 BICD1Q96G01 975 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 ADGRG7Q96K78 797 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 C8orf48Q96LL4 319 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 KATNAL1Q9BW62 490 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 PHF7Q9BWX1 381 aaPredicted RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 PABPC3Q9H361 631 aaKnown RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 SH2D4AQ9H788 454 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 MVB12BQ9H7P6 319 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 SEPSECSQ9HD40 501 aaKnown RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 TCF7L2Q9NQB0 619 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 LIN7CQ9NUP9 197 aaKnown RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 CHPF2Q9P2E5 772 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 KLQ9UEF7 1012 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 FBXO40Q9UH90 709 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 CDH22Q9UJ99 828 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 CNPY2Q9Y2B0 182 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 SRPRBQ9Y5M8 271 aaKnown RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 MORC2Q9Y6X9 1032 aaPredicted RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 COL11A1P12107 1806 aaPredicted RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 PHIPQ8WWQ0 1821 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 LOC400499M0QZD8 3231 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 HECTD1Q9ULT8 2610 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 FREM2Q5SZK8 3169 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 DOCK3Q8IZD9 2030 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 KMT2EQ8IZD2 1858 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 ZSWIM8A7E2V4 1837 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 DOCK2Q92608 1830 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 WDFY3Q8IZQ1 3526 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 GRIN2DO15399 1336 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 IL16Q14005 1332 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 SYNRGQ9UMZ2 1314 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 MED19A0JLT2 244 aaPredicted RBP1.73□□□□□ -2.13
CD44-212ENST00000524922 LGALS16A8MUM7 142 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 TAF4O00268 1085 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 SLC30A4O14863 429 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 MBTPS2O43462 519 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 XPNPEP2O43895 674 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 CNMDO75829 334 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 MMP1P03956 469 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 PROS1P07225 676 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 CA3P07451 260 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 LDHCP07864 332 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 IFIT1P09914 478 aaKnown RBP1.73□□□□□ -2.13
CD44-212ENST00000524922 IL9P15248 144 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 CSF2RAP15509 400 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 AOC1P19801 751 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 PDIA3P30101 505 aaKnown RBP1.73□□□□□ -2.13
CD44-212ENST00000524922 FMO4P31512 558 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 DPP6P42658 865 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 MTNR1AP48039 350 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 MVDP53602 400 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 AK2P54819 239 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 HMGCS2P54868 508 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 RNASELQ05823 741 aaKnown RBP1.73□□□□□ -2.13
CD44-212ENST00000524922 SPP2Q13103 211 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 ALKBH1Q13686 389 aaKnown RBP1.73□□□□□ -2.13
CD44-212ENST00000524922 DHX34Q14147 1143 aaKnown RBP1.73□□□□□ -2.13
CD44-212ENST00000524922 COG2Q14746 738 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 CCDC57Q2TAC2 916 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 KRTAP21-3Q3LHN1 58 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 LRRC24Q50LG9 513 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 EFHC1Q5JVL4 640 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 ADAM5Q6NVV9 412 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 AADACL2Q6P093 401 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 RHBDF2Q6PJF5 856 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 LDHAL6AQ6ZMR3 332 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 ASCL5Q7RTU5 278 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 C11orf96Q7Z7L8 435 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 PATL1Q86TB9 770 aaKnown RBP1.73□□□□□ -2.13
CD44-212ENST00000524922 RPAINQ86UA6 219 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 SLC44A2Q8IWA5 706 aaPredicted RBP1.73□□□□□ -2.13
CD44-212ENST00000524922 DCUN1D3Q8IWE4 304 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 ADSSL1Q8N142 457 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 NGEFQ8N5V2 710 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 AADATQ8N5Z0 425 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 PTGR2Q8N8N7 351 aaPredicted RBP1.73□□□□□ -2.13
CD44-212ENST00000524922 SCAIQ8N9R8 606 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 TRPV1Q8NER1 839 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 STT3BQ8TCJ2 826 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 APBB2Q92870 758 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 SECISBP2LQ93073 1101 aaKnown RBP1.73□□□□□ -2.13
CD44-212ENST00000524922 MUL1Q969V5 352 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 ARRDC3Q96B67 414 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms