RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 HJURPQ8NCD3 748 aaPredicted RBP3.91□□□□□ -1.78
SKP1-212ENST00000523966 HM13Q8TCT9 377 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 WFIKKN2Q8TEU8 576 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 ADAMTS14Q8WXS8 1223 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 RND1Q92730 232 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 SEMA3CQ99985 751 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 TMEM204Q9BSN7 226 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 PIGMQ9H3S5 423 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 SLC35C2Q9NQQ7 365 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 ANKEF1Q9NU02 776 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 PSD3Q9NYI0 1048 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 CLIC5Q9NZA1 410 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 SEC63Q9UGP8 760 aaKnown RBP3.91□□□□□ -1.78
SKP1-212ENST00000523966 ACSL5Q9ULC5 683 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 PPIEQ9UNP9 301 aaKnown RBP3.91□□□□□ -1.78
SKP1-212ENST00000523966 EXO1Q9UQ84 846 aaKnown RBP3.91□□□□□ -1.78
SKP1-212ENST00000523966 CLIC4Q9Y696 253 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 PASKQ96RG2 1323 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 SMAD9O15198 467 aaKnown RBP3.9□□□□□ -1.79
SKP1-212ENST00000523966 PLRG1O43660 514 aaKnown RBP3.9□□□□□ -1.79
SKP1-212ENST00000523966 AVILO75366 819 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 SNHG28P0DPA3 235 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 SSTR2P30874 369 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 FASLGP48023 281 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 HNRNPH2P55795 449 aaKnown RBP3.9□□□□□ -1.79
SKP1-212ENST00000523966 EGR4Q05215 589 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 BMP2KLQ5H9B9 411 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 KCNT1Q5JUK3 1230 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 RARS2Q5T160 578 aaKnown RBP3.9□□□□□ -1.79
SKP1-212ENST00000523966 AWAT2Q6E213 333 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 DLK2Q6UY11 383 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 CCNI2Q6ZMN8 369 aaPredicted RBP3.9□□□□□ -1.79
SKP1-212ENST00000523966 CFAP77Q6ZQR2 320 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 DNAAF5Q86Y56 855 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 SCYL3Q8IZE3 742 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 NME8Q8N427 588 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 IQCF1Q8N6M8 205 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 AVL9Q8NBF6 648 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 GSDMBQ8TAX9 411 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 PPP4R1Q8TF05 950 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 SCARB1Q8WTV0 552 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 TMED6Q8WW62 240 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 PRPF31Q8WWY3 499 aaKnown RBP3.9□□□□□ -1.79
SKP1-212ENST00000523966 PPP1R13BQ96KQ4 1090 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 C3orf30Q96M34 536 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 MTERF1Q99551 399 aaKnown RBP3.9□□□□□ -1.79
SKP1-212ENST00000523966 SLF1Q9BQI6 1058 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 KIFC3Q9BVG8 833 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 APOL6Q9BWW8 343 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 DNAJC18Q9H819 358 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 PDE7BQ9NP56 450 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 MMP25Q9NPA2 562 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 MTMR10Q9NXD2 777 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 MORF4L1Q9UBU8 362 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 FBXL2Q9UKC9 423 aa3.9□□□□□ -1.79
SKP1-212ENST00000523966 PTRH2Q9Y3E5 179 aaKnown RBP3.9□□□□□ -1.79
SKP1-212ENST00000523966 A6NL46 340 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 MAP2K7O14733 419 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 ICAM1P05362 532 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 ACAA1P09110 424 aaPredicted RBP3.89□□□□□ -1.79
SKP1-212ENST00000523966 IGHV4-30-4P0DP06 118 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 GJA1P17302 382 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 GNL1P36915 607 aaPredicted RBP3.89□□□□□ -1.79
SKP1-212ENST00000523966 TAS2R38P59533 333 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 IFI35P80217 286 aaPredicted RBP3.89□□□□□ -1.79
SKP1-212ENST00000523966 DHX34Q14147 1143 aaKnown RBP3.89□□□□□ -1.79
SKP1-212ENST00000523966 IGSF11Q5DX21 431 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 NAA16Q6N069 864 aaPredicted RBP3.89□□□□□ -1.79
SKP1-212ENST00000523966 C16orf54Q6UWD8 224 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 C9orf47Q6ZRZ4 202 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 PRPF39Q86UA1 669 aaKnown RBP3.89□□□□□ -1.79
SKP1-212ENST00000523966 TSPAN33Q86UF1 283 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 PGBD5Q8N414 524 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 PCDH20Q8N6Y1 951 aaKnown RBP3.89□□□□□ -1.79
SKP1-212ENST00000523966 EMC1Q8N766 993 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 SYT2Q8N9I0 419 aaPredicted RBP3.89□□□□□ -1.79
SKP1-212ENST00000523966 POMGNT2Q8NAT1 580 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 KCNH5Q8NCM2 988 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 ELP5Q8TE02 316 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 TRPC4APQ8TEL6 797 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 TAAR8Q969N4 342 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 ERP27Q96DN0 273 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 GRAMD2BQ96HH9 432 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 THOC3Q96J01 351 aaKnown RBP3.89□□□□□ -1.79
SKP1-212ENST00000523966 QRFPRQ96P65 431 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 CMKLR1Q99788 373 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 TM6SF1Q9BZW5 370 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 KCNN2Q9H2S1 579 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 RAD21L1Q9H4I0 556 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 CHMP1AQ9HD42 196 aaPredicted RBP3.89□□□□□ -1.79
SKP1-212ENST00000523966 NOX4Q9NPH5 578 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.89□□□□□ -1.792e-6■□□□□ 8.4
SKP1-212ENST00000523966 MCM9Q9NXL9 1143 aa3.89□□□□□ -1.79
SKP1-212ENST00000523966 IGLV5-37A0A075B6J1 123 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 OR2A25A4D2G3 310 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 LACTBL1A8MY62 500 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 SLC16A5O15375 505 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 P4HA2O15460 535 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 KCNN4O15554 427 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 ZBTB43O43298 467 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms