RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	IFT172	Q9UG01	1749 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	SIN3B	O75182	1162 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	LRCH4	O75427	683 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	WBP4	O75554	376 aa	Known RBP	10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	CACNG1	Q06432	222 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	CCDC81	Q6ZN84	652 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	GATAD2A	Q86YP4	633 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	RAD51AP1	Q96B01	352 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	ZNF354B	Q96LW1	612 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	PLEKHG4B	Q96PX9	1271 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	ZNF670	Q9BS34	389 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	ARL5C	A6NH57	179 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	TP53I11	O14683	189 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	CSDE1	O75534	798 aa	Known RBP	10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	MATN4	O95460	622 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	ZNF23	P17027	643 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	BMP6	P22004	513 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	BMPR1A	P36894	532 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	NFYC	Q13952	458 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	MINDY4	Q4G0A6	757 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	HECTD2	Q5U5R9	776 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	ALKBH2	Q6NS38	261 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	MCOLN2	Q8IZK6	566 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	SIX5	Q8N196	739 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	LMX1A	Q8TE12	382 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	NUS1	Q96E22	293 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	COX4I2	Q96KJ9	171 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	HERC2P3	Q9BVR0	1158 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	TM6SF2	Q9BZW4	377 aa		10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	RSPH9	Q9H1X1	276 aa	Predicted RBP	10.3	□□□□□ -0.76
TCF7-223	ENST00000522653	RCCD1	A6NED2	376 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	TRDMT1	O14717	391 aa	Known RBP	10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	DFNA5	O60443	496 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	TPST1	O60507	370 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	OTC	P00480	354 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	FMO4	P31512	558 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	POLD2	P49005	469 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	ORC1	Q13415	861 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	FAM214A	Q32MH5	1076 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	SELENOM	Q8WWX9	145 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	DUSP9	Q99956	384 aa	Known RBP	10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	SEMA3C	Q99985	751 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	THAP1	Q9NVV9	213 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	USE1	Q9NZ43	259 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	SLC12A4	Q9UP95	1085 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	ASTN2	O75129	1339 aa	Predicted RBP	10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	RNF103	O00237	685 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	ULK1	O75385	1050 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	CCNB1	P14635	433 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	RPL22	P35268	128 aa	Known RBP	10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	HNRNPK	P61978	463 aa	Known RBP eCLIP	10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	CAMK1	Q14012	370 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	SEL1L3	Q68CR1	1132 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	NUP54	Q7Z3B4	507 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	HDDC2	Q7Z4H3	204 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	FAM129C	Q86XR2	697 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	CCDC33	Q8N5R6	958 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	LMLN	Q96KR4	655 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	DUSP23	Q9BVJ7	150 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	ZNF304	Q9HCX3	659 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	ZDHHC7	Q9NXF8	308 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	GMIP	Q9P107	970 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	REXO2	Q9Y3B8	237 aa	Known RBP	10.29	□□□□□ -0.76
TCF7-223	ENST00000522653		A0A1W2PQH9	124 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	E2F8	A0AVK6	867 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	CLOCK	O15516	846 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	LILRB3	O75022	631 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	TALDO1	P37837	337 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	ELK3	P41970	407 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	GRIA2	P42262	883 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	IL12RB1	P42701	662 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	SLC7A2	P52569	658 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	TUBA4A	P68366	448 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	POTEH	Q6S545	545 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	VN1R5	Q7Z5H4	357 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	FSTL5	Q8N475	847 aa	Predicted RBP	10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	CERS5	Q8N5B7	392 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	LRIG1	Q96JA1	1093 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	ZNF599	Q96NL3	588 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	CDADC1	Q9BWV3	514 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	TMEM27	Q9HBJ8	222 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	DUOX1	Q9NRD9	1551 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	IRGM	A1A4Y4	181 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	KCNJ13	O60928	360 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	TSHR	P16473	764 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	ARF4	P18085	180 aa	Predicted RBP	10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	RPL17	P18621	184 aa	Known RBP	10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	HK2	P52789	917 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	RPS3A	P61247	264 aa	Known RBP	10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	FOLH1	Q04609	750 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	POU6F1	Q14863	301 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	GRIK5	Q16478	980 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	SP140L	Q9H930	580 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	TIGAR	Q9NQ88	270 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	GPATCH2L	Q9NWQ4	482 aa		10.29	□□□□□ -0.76
TCF7-223	ENST00000522653	FAM25A	B3EWG3	89 aa		10.28	□□□□□ -0.76
TCF7-223	ENST00000522653	FAM25C	B3EWG5	89 aa		10.28	□□□□□ -0.76
TCF7-223	ENST00000522653	FAM25G	B3EWG6	89 aa		10.28	□□□□□ -0.76
TCF7-223	ENST00000522653	FAM86B1	E9PN63	330 aa		10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms