RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 LYSMD1Q96S90 227 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 CLMPQ9H6B4 373 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 PCDH9Q9HC56 1237 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 TBC1D29Q9UFV1 150 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 ZNHIT2Q9UHR6 403 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 TTLL3Q9Y4R7 772 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 CES1P23141 567 aa20.11■□□□□ 0.81
PABPC1-217ENST00000521067 CSTF2P33240 577 aaKnown RBP eCLIP20.11■□□□□ 0.81
PABPC1-217ENST00000521067 GPLD1P80108 840 aa20.11■□□□□ 0.81
PABPC1-217ENST00000521067 LRP8Q14114 963 aa20.11■□□□□ 0.81
PABPC1-217ENST00000521067 QPCTQ16769 361 aa20.11■□□□□ 0.81
PABPC1-217ENST00000521067 HADHQ16836 314 aaKnown RBP20.11■□□□□ 0.81
PABPC1-217ENST00000521067 TIGD7Q6NT04 549 aaPredicted RBP20.11■□□□□ 0.81
PABPC1-217ENST00000521067 CHST15Q7LFX5 561 aaPredicted RBP20.11■□□□□ 0.81
PABPC1-217ENST00000521067 ZNF564Q8TBZ8 553 aaPredicted RBP20.11■□□□□ 0.81
PABPC1-217ENST00000521067 EID2BQ96D98 161 aa20.11■□□□□ 0.81
PABPC1-217ENST00000521067 SLC38A3Q99624 504 aa20.11■□□□□ 0.81
PABPC1-217ENST00000521067 ZNF670Q9BS34 389 aa20.11■□□□□ 0.81
PABPC1-217ENST00000521067 SPRY4Q9C004 299 aa20.11■□□□□ 0.81
PABPC1-217ENST00000521067 TRIM4Q9C037 500 aa20.11■□□□□ 0.81
PABPC1-217ENST00000521067 FAM117AQ9C073 453 aa20.11■□□□□ 0.81
PABPC1-217ENST00000521067 SLC39A1Q9NY26 324 aa20.11■□□□□ 0.81
PABPC1-217ENST00000521067 AMACRQ9UHK6 382 aa20.11■□□□□ 0.81
PABPC1-217ENST00000521067 UBR5O95071 2799 aaPredicted RBP20.1■□□□□ 0.81
PABPC1-217ENST00000521067 A6NCN8 305 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 EFCAB7A8K855 629 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 A8MU76 341 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 PROSCO94903 275 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 JCHAINP01591 159 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 GYPCP04921 128 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 PYGLP06737 847 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 LIFP15018 202 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 SPINT3P49223 89 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 UBASH3AP57075 661 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 HENMT1Q5T8I9 393 aaKnown RBP20.1■□□□□ 0.81
PABPC1-217ENST00000521067 ANKS6Q68DC2 871 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 IYDQ6PHW0 289 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 ARHGAP22Q7Z5H3 698 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 CNTD1Q8N815 330 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 DPYSL5Q9BPU6 564 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 DDA1Q9BW61 102 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 PACSIN1Q9BY11 444 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 DTLQ9NZJ0 730 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 VPS18Q9P253 973 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 KCNK6Q9Y257 313 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 MAST4O15021 2626 aa20.1■□□□□ 0.81
PABPC1-217ENST00000521067 C1orf232A0A0U1RR37 186 aa20.09■□□□□ 0.81
PABPC1-217ENST00000521067 B4E171 279 aa20.09■□□□□ 0.81
PABPC1-217ENST00000521067 KCNK1O00180 336 aa20.09■□□□□ 0.81
PABPC1-217ENST00000521067 TSPAN7P41732 249 aa20.09■□□□□ 0.81
PABPC1-217ENST00000521067 RPL26P61254 145 aaKnown RBP20.09■□□□□ 0.81
PABPC1-217ENST00000521067 NFATC2Q13469 925 aa20.09■□□□□ 0.81
PABPC1-217ENST00000521067 PDK2Q15119 407 aa20.09■□□□□ 0.81
PABPC1-217ENST00000521067 SNAP47Q5SQN1 464 aa20.09■□□□□ 0.81
PABPC1-217ENST00000521067 FAM129CQ86XR2 697 aa20.09■□□□□ 0.81
PABPC1-217ENST00000521067 RAVER1Q8IY67 606 aaKnown RBP20.09■□□□□ 0.81
PABPC1-217ENST00000521067 RAPGEF5Q92565 580 aa20.09■□□□□ 0.81
PABPC1-217ENST00000521067 FAM83DQ9H4H8 585 aa20.09■□□□□ 0.81
PABPC1-217ENST00000521067 RPL26L1Q9UNX3 145 aaKnown RBP20.09■□□□□ 0.81
PABPC1-217ENST00000521067 LUC7L2Q9Y383 392 aaKnown RBP20.09■□□□□ 0.81
PABPC1-217ENST00000521067 ANKRD66B4E2M5 251 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 TERTO14746 1132 aaKnown RBP20.08■□□□□ 0.81
PABPC1-217ENST00000521067 SUV39H1O43463 412 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 ACP5P13686 325 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 CD86P42081 329 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 HHEXQ03014 270 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 ZBTB17Q13105 803 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 ZNF648Q5T619 568 aaPredicted RBP20.08■□□□□ 0.81
PABPC1-217ENST00000521067 IL22RA1Q8N6P7 574 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 OR10G6Q8NH81 332 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 HDAC11Q96DB2 347 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 AHCYL2Q96HN2 611 aaKnown RBP20.08■□□□□ 0.81
PABPC1-217ENST00000521067 CTRCQ99895 268 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 ARFGAP3Q9NP61 516 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 SARS2Q9NP81 518 aaKnown RBP20.08■□□□□ 0.81
PABPC1-217ENST00000521067 GEMIN8Q9NWZ8 242 aaKnown RBP20.08■□□□□ 0.81
PABPC1-217ENST00000521067 CTTNBP2NLQ9P2B4 639 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 IL17BQ9UHF5 180 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 PILRAQ9UKJ1 303 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 DNPEPQ9ULA0 475 aa20.08■□□□□ 0.81
PABPC1-217ENST00000521067 HEMK1Q9Y5R4 338 aaPredicted RBP20.08■□□□□ 0.81
PABPC1-217ENST00000521067 RAD1O60671 282 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 KDELR1P24390 212 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 ATP1A2P50993 1020 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 DCAF12Q5T6F0 453 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 WDR74Q6RFH5 385 aaPredicted RBP20.07■□□□□ 0.8
PABPC1-217ENST00000521067 TIPARPQ7Z3E1 657 aaKnown RBP20.07■□□□□ 0.8
PABPC1-217ENST00000521067 CCDC13Q8IYE1 715 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 CACNA2D3Q8IZS8 1091 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 CCNYQ8ND76 341 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 CCDC112Q8NEF3 446 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 NCSTNQ92542 709 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 RTP4Q96DX8 246 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 RNF157Q96PX1 679 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 MLPHQ9BV36 600 aaPredicted RBP20.07■□□□□ 0.8
PABPC1-217ENST00000521067 ASPSCR1Q9BZE9 553 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 BRD8Q9H0E9 1235 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 APMAPQ9HDC9 416 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 ATXN10Q9UBB4 475 aa20.07■□□□□ 0.8
PABPC1-217ENST00000521067 RELNP78509 3460 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms