RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 EXD3Q8N9H8 876 aa19.49■□□□□ 0.71
PABPC1-215ENST00000520804 AGBL5Q8NDL9 886 aa19.49■□□□□ 0.71
PABPC1-215ENST00000520804 SLC37A2Q8TED4 501 aa19.49■□□□□ 0.71
PABPC1-215ENST00000520804 RNF157Q96PX1 679 aa19.49■□□□□ 0.71
PABPC1-215ENST00000520804 MLPHQ9BV36 600 aaPredicted RBP19.49■□□□□ 0.71
PABPC1-215ENST00000520804 FAM83DQ9H4H8 585 aa19.49■□□□□ 0.71
PABPC1-215ENST00000520804 ZNHIT2Q9UHR6 403 aa19.49■□□□□ 0.71
PABPC1-215ENST00000520804 PCDHGA4Q9Y5G9 962 aa19.49■□□□□ 0.71
PABPC1-215ENST00000520804 TRBV23OR9-2A0A075B6M9 112 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 RGSL1A5PLK6 1076 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 FADS2P1A8MWK0 482 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 ANKRD66B4E2M5 251 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 STMND1H3BQB6 276 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 KCNK1O00180 336 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 ATP1A1P05023 1023 aaKnown RBP19.48■□□□□ 0.71
PABPC1-215ENST00000520804 TMEM253P0C7T8 217 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 WT1P19544 449 aaPredicted RBP19.48■□□□□ 0.71
PABPC1-215ENST00000520804 MPSTP25325 297 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 CD86P42081 329 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 ARSDP51689 593 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 IFI35P80217 286 aaPredicted RBP19.48■□□□□ 0.71
PABPC1-215ENST00000520804 PPIDQ08752 370 aaKnown RBP19.48■□□□□ 0.71
PABPC1-215ENST00000520804 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.48■□□□□ 0.71
PABPC1-215ENST00000520804 TMEM71Q6P5X7 295 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 XKR5Q6UX68 686 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 ZNF761Q86XN6 746 aaPredicted RBP19.48■□□□□ 0.71
PABPC1-215ENST00000520804 CNTD1Q8N815 330 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 ZSCAN1Q8NBB4 408 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 CCHCR1Q8TD31 782 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 PMEPA1Q969W9 287 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 ZNF830Q96NB3 372 aaPredicted RBP19.48■□□□□ 0.71
PABPC1-215ENST00000520804 SLC38A3Q99624 504 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 XPO4Q9C0E2 1151 aaKnown RBP19.48■□□□□ 0.71
PABPC1-215ENST00000520804 RMI1Q9H9A7 625 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 PKD2L2Q9NZM6 624 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 TMEM9Q9P0T7 183 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 PRKAB1Q9Y478 270 aa19.48■□□□□ 0.71
PABPC1-215ENST00000520804 TPM3P06753 285 aa19.47■□□□□ 0.71
PABPC1-215ENST00000520804 CSTF2P33240 577 aaKnown RBP eCLIP19.47■□□□□ 0.71
PABPC1-215ENST00000520804 ZBTB17Q13105 803 aa19.47■□□□□ 0.71
PABPC1-215ENST00000520804 MESDQ14696 234 aa19.47■□□□□ 0.71
PABPC1-215ENST00000520804 CHST15Q7LFX5 561 aaPredicted RBP19.47■□□□□ 0.71
PABPC1-215ENST00000520804 PLD5Q8N7P1 536 aa19.47■□□□□ 0.71
PABPC1-215ENST00000520804 CCDC112Q8NEF3 446 aa19.47■□□□□ 0.71
PABPC1-215ENST00000520804 EXTL1Q92935 676 aa19.47■□□□□ 0.71
PABPC1-215ENST00000520804 DDA1Q9BW61 102 aa19.47■□□□□ 0.71
PABPC1-215ENST00000520804 ADGRE3Q9BY15 652 aa19.47■□□□□ 0.71
PABPC1-215ENST00000520804 PDP2Q9P2J9 529 aa19.47■□□□□ 0.71
PABPC1-215ENST00000520804 TBC1D29Q9UFV1 150 aa19.47■□□□□ 0.71
PABPC1-215ENST00000520804 SDK2Q58EX2 2172 aa19.46■□□□□ 0.71
PABPC1-215ENST00000520804 ZNF487B1APH4 448 aa19.46■□□□□ 0.71
PABPC1-215ENST00000520804 OR8K1Q8NGG5 319 aa19.46■□□□□ 0.71
PABPC1-215ENST00000520804 OR10G6Q8NH81 332 aa19.46■□□□□ 0.71
PABPC1-215ENST00000520804 JPH3Q8WXH2 748 aaPredicted RBP19.46■□□□□ 0.71
PABPC1-215ENST00000520804 ART4Q93070 314 aa19.46■□□□□ 0.71
PABPC1-215ENST00000520804 NKD1Q969G9 470 aa19.46■□□□□ 0.71
PABPC1-215ENST00000520804 AHCYL2Q96HN2 611 aaKnown RBP19.46■□□□□ 0.71
PABPC1-215ENST00000520804 DNAJC7Q99615 494 aa19.46■□□□□ 0.71
PABPC1-215ENST00000520804 ARHGAP9Q9BRR9 750 aa19.46■□□□□ 0.71
PABPC1-215ENST00000520804 DEF6Q9H4E7 631 aa19.46■□□□□ 0.71
PABPC1-215ENST00000520804 SARS2Q9NP81 518 aaKnown RBP19.46■□□□□ 0.71
PABPC1-215ENST00000520804 KCNK6Q9Y257 313 aa19.46■□□□□ 0.71
PABPC1-215ENST00000520804 HEY1Q9Y5J3 304 aa19.46■□□□□ 0.71
PABPC1-215ENST00000520804 SSU72P8A0A1W2PR75 194 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 LRRD1A4D1F6 860 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 A6NCN8 305 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 B4E171 279 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 DUX1O43812 170 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 ACP5P13686 325 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 TSPAN7P41732 249 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 ATP1A2P50993 1020 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 HHEXQ03014 270 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 GALNT3Q14435 633 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 SLC9A4Q6AI14 798 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 IYDQ6PHW0 289 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 LYSMD3Q7Z3D4 306 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 VSIG1Q86XK7 387 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 SLC35G2Q8TBE7 412 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 EID2BQ96D98 161 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 HERPUD2Q9BSE4 406 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 ZMYND15Q9H091 742 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 CARD9Q9H257 536 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 OCIAD1Q9NX40 245 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 SLC39A1Q9NY26 324 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 B3GALT1Q9Y5Z6 326 aa19.45■□□□□ 0.7
PABPC1-215ENST00000520804 C3orf70A6NLC5 250 aaPredicted RBP19.44■□□□□ 0.7
PABPC1-215ENST00000520804 GRID2O43424 1007 aa19.44■□□□□ 0.7
PABPC1-215ENST00000520804 AKR1B10O60218 316 aa19.44■□□□□ 0.7
PABPC1-215ENST00000520804 NUAK1O60285 661 aa19.44■□□□□ 0.7
PABPC1-215ENST00000520804 PPM1FP49593 454 aaPredicted RBP19.44■□□□□ 0.7
PABPC1-215ENST00000520804 CYP4F2P78329 520 aa19.44■□□□□ 0.7
PABPC1-215ENST00000520804 AP1B1Q10567 949 aa19.44■□□□□ 0.7
PABPC1-215ENST00000520804 TRIM14Q14142 442 aa19.44■□□□□ 0.7
PABPC1-215ENST00000520804 WDR74Q6RFH5 385 aaPredicted RBP19.44■□□□□ 0.7
PABPC1-215ENST00000520804 FAM129CQ86XR2 697 aa19.44■□□□□ 0.7
PABPC1-215ENST00000520804 BMPERQ8N8U9 685 aa19.44■□□□□ 0.7
PABPC1-215ENST00000520804 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.44■□□□□ 0.7
PABPC1-215ENST00000520804 HTR3CQ8WXA8 447 aa19.44■□□□□ 0.7
PABPC1-215ENST00000520804 SH3KBP1Q96B97 665 aa19.44■□□□□ 0.7
PABPC1-215ENST00000520804 IMP4Q96G21 291 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms