RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 LRRC57Q8N9N7 239 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 TEX45Q8NA69 505 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 GJC3Q8NFK1 279 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 CMASQ8NFW8 434 aaPredicted RBP4.12□□□□□ -1.75
SQLE-204ENST00000520493 RASSF8Q8NHQ8 419 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 GOT1L1Q8NHS2 421 aaPredicted RBP4.12□□□□□ -1.75
SQLE-204ENST00000520493 PABPC5Q96DU9 382 aaKnown RBP4.12□□□□□ -1.75
SQLE-204ENST00000520493 ZC3HAV1LQ96H79 300 aaKnown RBP4.12□□□□□ -1.75
SQLE-204ENST00000520493 GCNAQ96QF7 691 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 TMEM47Q9BQJ4 181 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 MVB12BQ9H7P6 319 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 XAB2Q9HCS7 855 aaKnown RBP4.12□□□□□ -1.75
SQLE-204ENST00000520493 CD93Q9NPY3 652 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 CWC25Q9NXE8 425 aaPredicted RBP4.12□□□□□ -1.75
SQLE-204ENST00000520493 COPG2Q9UBF2 871 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 NENFQ9UMX5 172 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 NFE2L3Q9Y4A8 694 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 SNX5Q9Y5X3 404 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 PTGDR2Q9Y5Y4 395 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 A8MV72 311 aaPredicted RBP4.11□□□□□ -1.75
SQLE-204ENST00000520493 BECN2A8MW95 431 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 VWA5AO00534 786 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 CTDSP2O14595 271 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 PAPSS1O43252 624 aaPredicted RBP4.11□□□□□ -1.75
SQLE-204ENST00000520493 RGS14O43566 566 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 MITFO75030 526 aaPredicted RBP4.11□□□□□ -1.75
SQLE-204ENST00000520493 JRKO75564 520 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 NDUFB4O95168 129 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 PAPSS2O95340 614 aaPredicted RBP4.11□□□□□ -1.75
SQLE-204ENST00000520493 HIST1H2ABP04908 130 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 ATP6V1B1P15313 513 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 HIST1H2ADP20671 130 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 ITGAXP20702 1163 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 KRT2P35908 639 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 THPOP40225 353 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 CAPZA2P47755 286 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 CXCR3P49682 368 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 STAT2P52630 851 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 MRPS34P82930 218 aaKnown RBP4.11□□□□□ -1.75
SQLE-204ENST00000520493 PPARDQ03181 441 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 ST3GAL1Q11201 340 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 GRIK3Q13003 919 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 IKQ13123 557 aaPredicted RBP4.11□□□□□ -1.75
SQLE-204ENST00000520493 GPS2Q13227 327 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 ITGADQ13349 1161 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 LPIN1Q14693 890 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 SOWAHAQ2M3V2 549 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 COL28A1Q2UY09 1125 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 SGO1Q5FBB7 561 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 FSCBQ5H9T9 825 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 FNBP1LQ5T0N5 605 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 KIAA0930Q6ICG6 404 aaPredicted RBP4.11□□□□□ -1.75
SQLE-204ENST00000520493 PLBD1Q6P4A8 553 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 DLK2Q6UY11 383 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 CFAP77Q6ZQR2 320 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 MFSD6Q6ZSS7 791 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 GET4Q7L5D6 327 aaPredicted RBP4.11□□□□□ -1.75
SQLE-204ENST00000520493 HIST3H2AQ7L7L0 130 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 CHST3Q7LGC8 479 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 PATL1Q86TB9 770 aaKnown RBP4.11□□□□□ -1.75
SQLE-204ENST00000520493 IQCA1Q86XH1 822 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 PALB2Q86YC2 1186 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 LURAP1LQ8IV03 231 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 SFTPA2Q8IWL1 248 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 MSANTD4Q8NCY6 345 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 ENGASEQ8NFI3 743 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 URB1-AS1Q96HZ7 61 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 HGH1Q9BTY7 390 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 KLHL31Q9H511 634 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 DENND2DQ9H6A0 471 aaPredicted RBP4.11□□□□□ -1.75
SQLE-204ENST00000520493 LTB4R2Q9NPC1 389 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 WSB2Q9NYS7 404 aaPredicted RBP4.11□□□□□ -1.75
SQLE-204ENST00000520493 CWC15Q9P013 229 aaKnown RBP4.11□□□□□ -1.75
SQLE-204ENST00000520493 C5AR2Q9P296 337 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 CEPT1Q9Y6K0 416 aa4.11□□□□□ -1.75
SQLE-204ENST00000520493 ZFP37Q9Y6Q3 630 aaPredicted RBP4.11□□□□□ -1.75
SQLE-204ENST00000520493 A0A1B0GVT2 93 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 TCRBV21S2A2A0A5A6 115 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 LRRC72A6NJI9 287 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 INAFM1C9JVW0 142 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 STMND1H3BQB6 276 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 NKX2-2O95096 273 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 TPOP07202 933 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 CCDC175P0C221 793 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 MYBL1P10243 752 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 PLA2G2AP14555 144 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 EDN2P20800 178 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 HOXC9P31274 260 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 HOXC13P31276 330 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 DCTDP32321 178 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 DSCR9P59020 149 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 SELENOVP59797 346 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 ESCO2Q56NI9 601 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 PRAMEF19Q5SWL8 479 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 RARS2Q5T160 578 aaKnown RBP4.1□□□□□ -1.75
SQLE-204ENST00000520493 HEPHL1Q6MZM0 1159 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 FAM43BQ6ZT52 329 aaPredicted RBP4.1□□□□□ -1.75
SQLE-204ENST00000520493 FAM47EQ6ZV65 393 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 TDRPQ86YL5 185 aa4.1□□□□□ -1.75
SQLE-204ENST00000520493 LINC00346Q8IVM7 164 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms