RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SYVN1Q86TM6 617 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 ZDHHC17Q8IUH5 632 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 PLXDC1Q8IUK5 500 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 ZNF683Q8IZ20 524 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 DEFB106AQ8N104 65 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 NAGSQ8N159 534 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 PPM1KQ8N3J5 372 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 Q8NA96 180 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 TSEN2Q8NCE0 465 aaKnown RBP4.87□□□□□ -1.63
SDCBP-207ENST00000520168 ST6GALNAC3Q8NDV1 305 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 OR7D4Q8NG98 312 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 NUDT8Q8WV74 236 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 ZNF641Q96N77 438 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-207ENST00000520168 FCRL4Q96PJ5 515 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 SLC38A3Q99624 504 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 CTRCQ99895 268 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 NCAPGQ9BPX3 1015 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 SPON2Q9BUD6 331 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 TRIM55Q9BYV6 548 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-207ENST00000520168 TTYH3Q9C0H2 523 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 TKTL2Q9H0I9 626 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 ING2Q9H160 280 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 MAGEH1Q9H213 219 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 CARS2Q9HA77 564 aaKnown RBP4.87□□□□□ -1.63
SDCBP-207ENST00000520168 SARS2Q9NP81 518 aaKnown RBP4.87□□□□□ -1.63
SDCBP-207ENST00000520168 CHST11Q9NPF2 352 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 PHPT1Q9NRX4 125 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-207ENST00000520168 AGPAT4Q9NRZ5 378 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 SPATS2LQ9NUQ6 558 aaKnown RBP4.87□□□□□ -1.63
SDCBP-207ENST00000520168 EGFL7Q9UHF1 273 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 USP25Q9UHP3 1055 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 MOSPD1Q9UJG1 213 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 PADI1Q9ULC6 663 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 RNF112Q9ULX5 631 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 COQ6Q9Y2Z9 468 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 MN1Q10571 1320 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-207ENST00000520168 CCDC168Q8NDH2 2452 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 ANKHD1Q8IWZ3 2542 aaKnown RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 VPS13CQ709C8 3753 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 A0A1B0GTL3 188 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 A0A1B0GUH1 482 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 RGS9O75916 674 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 DNAJB5O75953 348 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 STK10O94804 968 aaKnown RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 NDUFA10O95299 355 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 CD160O95971 181 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 ELFN1P0C7U0 828 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 CD1EP15812 388 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 LPOP22079 712 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 MPSTP25325 297 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 CASP1P29466 404 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 SSTR2P30874 369 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 LIG3P49916 1009 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 RRADP55042 308 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 RPS15P62841 145 aaKnown RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 POLR2LP62875 67 aaKnown RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 PITX1P78337 314 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 PDCLQ13371 301 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 ART3Q13508 389 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 DNASE1L3Q13609 305 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 TESK1Q15569 626 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 CBWD6Q4V339 395 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 ZCWPW2Q504Y3 356 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 PRR30Q53SZ7 412 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 CBWD3Q5JTY5 395 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 CBWD5Q5RIA9 395 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 LYPLAL1Q5VWZ2 237 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 ATL3Q6DD88 541 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 SLC30A9Q6PML9 568 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 SHC4Q6S5L8 630 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 C11orf57Q6ZUT1 292 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 SLC26A9Q7LBE3 791 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 DNAAF5Q86Y56 855 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 ZGRF1Q86YA3 2104 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 KRTAP19-1Q8IUB9 90 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 EGFL6Q8IUX8 553 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 RASGRP3Q8IV61 690 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 SFTPA2Q8IWL1 248 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 DMRTC2Q8IXT2 367 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 DTWD1Q8N5C7 304 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 TMEM102Q8N9M5 508 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 C1orf131Q8NDD1 294 aaKnown RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 ZNF397Q8NF99 534 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 OR6K2Q8NGY2 324 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 CCL4L1Q8NHW4 92 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 COG1Q8WTW3 980 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 TM9SF4Q92544 642 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 SNRNP40Q96DI7 357 aaKnown RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 FAM81BQ96LP2 452 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 ZNF396Q96N95 335 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 AGAP3Q96P47 875 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 SMAD5Q99717 465 aaKnown RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 BARD1Q99728 777 aaKnown RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 ZSWIM1Q9BR11 485 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 BRD8Q9H0E9 1235 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 TSPAN10Q9H1Z9 355 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 ACTL8Q9H568 366 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 APMAPQ9HDC9 416 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms