RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 PDE1BQ01064 536 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 CSTF1Q05048 431 aaKnown RBP-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 MEF2CQ06413 473 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 GNL2Q13823 731 aaKnown RBP-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 MTF1Q14872 753 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 RRS1Q15050 365 aaKnown RBP-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 ACAP2Q15057 778 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 SAFBQ15424 915 aaKnown RBP eCLIP-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 TMEM88Q6PEY1 159 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 MON1AQ86VX9 555 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 SFTPA2Q8IWL1 248 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 PHC2Q8IXK0 858 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 AMOTL1Q8IY63 956 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 EID3Q8N140 333 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 PRR18Q8N4B5 295 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 RNF175Q8N4F7 328 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 KLHDC1Q8N7A1 406 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 SYT14Q8NB59 555 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 OR4N2Q8NGD1 307 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZNF564Q8TBZ8 553 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 SMARCD2Q92925 531 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 PIGTQ969N2 578 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 AZIN2Q96A70 460 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 APIPQ96GX9 242 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZNF597Q96LX8 424 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 MAPKAP1Q9BPZ7 522 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 C16orf70Q9BSU1 422 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 FUCA2Q9BTY2 467 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 GLIS2Q9BZE0 524 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 ARMT1Q9H993 441 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 KCNK9Q9NPC2 374 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 TEX10Q9NXF1 929 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 CLEC5AQ9NY25 188 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 STAP2Q9UGK3 403 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 POLLQ9UGP5 575 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 MID2Q9UJV3 735 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 CLEC4EQ9ULY5 219 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 CAPN11Q9UMQ6 739 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 PSG11Q9UQ72 335 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 DNAJC16Q9Y2G8 782 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 CAPN7Q9Y6W3 813 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 IGLV4-60A0A075B6I1 120 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 CYP3A7-CYP3A51PA0A087WV96 503 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 A0A096LPK6 155 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 IGHV4-61A0A0C4DH41 118 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 A0A1W2PN81 502 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 TARSL2A2RTX5 802 aaKnown RBP-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 K7ENM7 598 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 M0QYT0 321 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 PDXKO00764 312 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZNF195O14628 629 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 MAGEC1O60732 1142 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 APBB3O95704 486 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 IGHV4-59P01825 116 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 CGB3P0DN86 165 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 HAPLN1P10915 354 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 PRKACGP22612 351 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 CYP3A7P24462 503 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 EPHA2P29317 976 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 CHRNA7P36544 502 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 CAPGP40121 348 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 GPR12P47775 334 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 HDAC4P56524 1084 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 ADARB1P78563 741 aaKnown RBP-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 CBFBQ13951 182 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 CTF1Q16619 201 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 CHRFAM7AQ494W8 412 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 FIP1L1Q6UN15 594 aaKnown RBP-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 STRA8Q7Z7C7 330 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 ISCA2Q86U28 154 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 NAXDQ8IW45 347 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 RAB42Q8N4Z0 105 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 Q8NDZ9 215 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 RASSF8Q8NHQ8 419 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 TDRD7Q8NHU6 1098 aaKnown RBP-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 OLIG1Q8TAK6 271 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 NPRL2Q8WTW4 380 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 SNRNP27Q8WVK2 155 aaKnown RBP-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 NINJ1Q92982 152 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 TMEM143Q96AN5 459 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 SLCO4A1Q96BD0 722 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 TADA1Q96BN2 335 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 PSMB7Q99436 277 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 CMKLR1Q99788 373 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 SEMA3CQ99985 751 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 HAUS8Q9BT25 410 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 TDRD1Q9BXT4 1180 aaKnown RBP-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 STK31Q9BXU1 1019 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 RETNQ9HD89 108 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 MARCH4Q9P2E8 410 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 THAP10Q9P2Z0 257 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 MARCOQ9UEW3 520 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 PPP1R3CQ9UQK1 317 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 THRAP3Q9Y2W1 955 aaKnown RBP-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 MED13Q9UHV7 2174 aa-0.89□□□□□ -2.55
RNU6-542P-201ENST00000516405 TMEM8BA6NDV4 472 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 USP17L23D6RBM5 183 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 PLK4O00444 970 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 RGS11O94810 467 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 TOXO94900 526 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms