RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 NAB1Q13506 487 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 IRF4Q15306 451 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 TYSND1Q2T9J0 566 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 PLK5Q496M5 336 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 AARS2Q5JTZ9 985 aaKnown RBP11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 WDR45BQ5MNZ6 344 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 HP1BP3Q5SSJ5 553 aaPredicted RBP11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 LYPLAL1Q5VWZ2 237 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 PEAR1Q5VY43 1037 aaPredicted RBP11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 MRNIPQ6NTE8 343 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 NEPROQ6NW34 567 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 CES3Q6UWW8 571 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 KIAA0408Q6ZU52 694 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 ABI3BPQ7Z7G0 1075 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 IQCHQ86VS3 1027 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 SLC41A1Q8IVJ1 513 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 ZNF398Q8TD17 642 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 BTN2A2Q8WVV5 523 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 SCAMP4Q969E2 229 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 CFAP36Q96G28 342 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 COX14Q96I36 57 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 FAM167BQ9BTA0 163 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 TEX101Q9BY14 249 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 EPB41L4BQ9H329 900 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 SUDS3Q9H7L9 328 aaPredicted RBP11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 EBF2Q9HAK2 575 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 GPR27Q9NS67 375 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 NSMCE4AQ9NXX6 385 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 FETUBQ9UGM5 382 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 SLC30A1Q9Y6M5 507 aa11.9□□□□□ -0.5
PDLIM5-220ENST00000514830 USP34Q70CQ2 3546 aa11.9□□□□□ -0.51
PDLIM5-220ENST00000514830 CACNA1EQ15878 2313 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 EP300Q09472 2414 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 FAM159BA6NKW6 160 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 FADS2P1A8MWK0 482 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 FPGTO14772 594 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 RAD51BO15315 384 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 CD3EAPO15446 510 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 RHOBTB1O94844 696 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 FSBPO95073 299 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 LMNAP02545 664 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 H2AFXP16104 143 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 MAT2AP31153 395 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 IGFALSP35858 605 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 PPARGP37231 505 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 TTPAP49638 278 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 ADARP55265 1226 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 PFN3P60673 137 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 RACK1P63244 317 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 TMPRSS15P98073 1019 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 ITIH4Q14624 930 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 CHRNA6Q15825 494 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 ATP13A5Q4VNC0 1218 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 RNF187Q5TA31 235 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 FAM151BQ6UXP7 276 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 PACS1Q6VY07 963 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 KYAT3Q6YP21 454 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 GCNT7Q6ZNI0 430 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 KCNMB4Q86W47 210 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 SLC26A11Q86WA9 606 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 DCP2Q8IU60 420 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 CILP2Q8IUL8 1156 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 NXPE1Q8N323 547 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 DDHD1Q8NEL9 900 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 OR6P1Q8NGX9 317 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 HEXDCQ8WVB3 486 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 GLYATL1Q969I3 302 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 HSPA12BQ96MM6 686 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 SPATA16Q9BXB7 569 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 ACSS3Q9H6R3 686 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 MBNL1Q9NR56 388 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 CATSPERZQ9NTU4 200 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 C20orf96Q9NUD7 363 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 CD84Q9UIB8 345 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 TMPRSS11EQ9UL52 423 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 CNOT6Q9ULM6 557 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 INVSQ9Y283 1065 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 VPS9D1Q9Y2B5 631 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 GVINP1Q7Z2Y8 2422 aa11.89□□□□□ -0.51
PDLIM5-220ENST00000514830 A0A087WUV0 522 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 CCDC78A2IDD5 438 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 A6NNZ2 444 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 GPR89AB7ZAQ6 455 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 K7ESM1 405 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 CCL22O00626 93 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 PFDN6O15212 129 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 SLC31A1O15431 190 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 GPR89BP0CG08 455 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 ACRV1P26436 265 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 GPR1P46091 355 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 RABIFP47224 123 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 KIAA1024LP59773 190 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 THOC5Q13769 683 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 INPP5AQ14642 412 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 FASTKD1Q53R41 847 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 HSP90AA5PQ58FG0 334 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 LDLRAP1Q5SW96 308 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms