RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 WSB2Q9NYS7 404 aaPredicted RBP5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 OR2A25A4D2G3 310 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 B4DLN1 442 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 MID1O15344 667 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 INSIG1O15503 277 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 PAPSS1O43252 624 aaPredicted RBP5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 SPINT2O43291 252 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 RFPL2O75678 378 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 FCGR1AP12314 374 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 SLC15A1P46059 708 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 KCNJ4P48050 445 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 CLCNKAP51800 687 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 MRPL12P52815 198 aaKnown RBP5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 MFAP4P55083 255 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 TAS2R38P59533 333 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 FOXM1Q08050 763 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 ZNF155Q12901 538 aaPredicted RBP5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 TRAF2Q12933 501 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 HLFQ16534 295 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 KCNT1Q5JUK3 1230 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 RARS2Q5T160 578 aaKnown RBP5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 DCST1Q5T197 706 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 RGMBQ6NW40 437 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 AACSQ86V21 672 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 LINC00346Q8IVM7 164 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 HACE1Q8IYU2 909 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 SAMD14Q8IZD0 417 aaPredicted RBP5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 IL17RCQ8NAC3 791 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 HM13Q8TCT9 377 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 DUSP19Q8WTR2 217 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 SAT2Q96F10 170 aaPredicted RBP5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 C3orf30Q96M34 536 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 NEUROD6Q96NK8 337 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 MAGIXQ9H6Y5 334 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 GAREM1Q9H706 876 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 EPB41L5Q9HCM4 733 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 PLSCR4Q9NRQ2 329 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 WNT16Q9UBV4 365 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 STK39Q9UEW8 545 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 SEC63Q9UGP8 760 aaKnown RBP5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 SNX8Q9Y5X2 465 aa5.09□□□□□ -1.59
HMGCS1-207ENST00000514610 IGLV5-37A0A075B6J1 123 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 KANSL1LA0AUZ9 987 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 CTDSP2O14595 271 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 MAP2K7O14733 419 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 SMAD9O15198 467 aaKnown RBP5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 PLPP2O43688 288 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 BEST1O76090 585 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 HIST1H2ABP04908 130 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 LINC00271P0C7V0 271 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 HIST1H2ADP20671 130 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 RRM1P23921 792 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 TNFRSF8P28908 595 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 RAD52P43351 418 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 FASLGP48023 281 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 SUOXP51687 545 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 CLDN20P56880 219 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 KIF5AQ12840 1032 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 STK4Q13043 487 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 PCLAFQ15004 111 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 HIST3H2AQ7L7L0 130 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 GLCCI1Q86VQ1 547 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 SPATA2LQ8IUW3 424 aaPredicted RBP5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 TAGAPQ8N103 731 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 SCML4Q8N228 414 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 RASGEF1CQ8N431 466 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 C1orf131Q8NDD1 294 aaKnown RBP5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 OR5R1Q8NH85 324 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 TANKQ92844 425 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 TAAR8Q969N4 342 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 TMEM204Q9BSN7 226 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 PCDH9Q9HC56 1237 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 PDE7BQ9NP56 450 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 PADI1Q9ULC6 663 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 TMEM5Q9Y2B1 443 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 LOXL2Q9Y4K0 774 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 NFS1Q9Y697 457 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 KAT6BQ8WYB5 2073 aa5.08□□□□□ -1.6
HMGCS1-207ENST00000514610 GOLGA6L9A6NEM1 432 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 FAM90A26D6RGX4 464 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 MITFO75030 526 aaPredicted RBP5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 SNHG28P0DPA3 235 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 ACTN1P12814 892 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 MMP9P14780 707 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 CORO1AP31146 461 aaKnown RBP5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 EIF2DP41214 584 aaKnown RBP5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 MSH2P43246 934 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 NRIP1P48552 1158 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 DSCR9P59020 149 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 SEC61A1P61619 476 aaKnown RBP5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 TUBA1BP68363 451 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 MRPS5P82675 430 aaKnown RBP5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 LRMPQ12912 555 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 DLG1Q12959 904 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 MAD2L1Q13257 205 aaPredicted RBP5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 FHL1Q13642 323 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 DLG2Q15700 870 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 CALCRLQ16602 461 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 C18orf63Q68DL7 685 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms