RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 UBXN1Q04323 297 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 SEMA5AQ13591 1074 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 IL11RAQ14626 422 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 DENND2CQ68D51 928 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 ZNF787Q6DD87 383 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 IYDQ6PHW0 289 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 DOK6Q6PKX4 331 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 TECPR1Q7Z6L1 1165 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 GALNT13Q8IUC8 556 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 AVL9Q8NBF6 648 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 SLC20A1Q8WUM9 679 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 SEC14L1Q92503 715 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 SCRN2Q96FV2 425 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 CELF6Q96J87 481 aaKnown RBP13.8□□□□□ -0.2
SPCS3-204ENST00000513139 EIF3CQ99613 913 aaKnown RBP13.8□□□□□ -0.2
SPCS3-204ENST00000513139 SP110Q9HB58 689 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 GOLGA6AQ9NYA3 693 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 OAS3Q9Y6K5 1087 aaKnown RBP13.8□□□□□ -0.2
SPCS3-204ENST00000513139 APCP25054 2843 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 OTOGQ6ZRI0 2925 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 PIPSLA2A3N6 862 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 CDC14CA4D256 554 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 ANKRD62A6NC57 917 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 WIPF3A6NGB9 483 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 TOX3O15405 576 aaPredicted RBP13.79□□□□□ -0.2
SPCS3-204ENST00000513139 CCP110O43303 1012 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 KATNA1O75449 491 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 SORBS2O94875 1100 aaKnown RBP13.79□□□□□ -0.2
SPCS3-204ENST00000513139 EML2O95834 649 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 SOD1P00441 154 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 CPP00450 1065 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 C9P02748 559 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 UNGP13051 313 aaPredicted RBP13.79□□□□□ -0.2
SPCS3-204ENST00000513139 SLC2A4P14672 509 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 ZNF28P17035 718 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 CHRNB2P17787 502 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 LHCGRP22888 699 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 VARSP26640 1264 aaKnown RBP13.79□□□□□ -0.2
SPCS3-204ENST00000513139 GARSP41250 739 aaKnown RBP13.79□□□□□ -0.2
SPCS3-204ENST00000513139 NFATC2Q13469 925 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 FKBP15Q5T1M5 1219 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 TMCO4Q5TGY1 634 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 SLC9B2Q86UD5 537 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 GALNT6Q8NCL4 622 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 STAMBPL1Q96FJ0 436 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 ZNF599Q96NL3 588 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 MCCC1Q96RQ3 725 aaPredicted RBP13.79□□□□□ -0.2
SPCS3-204ENST00000513139 HERPUD2Q9BSE4 406 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 CNPY3Q9BT09 278 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 TWSG1Q9GZX9 223 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 MLXIPLQ9NP71 852 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 ADAM22Q9P0K1 906 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 TMEM98Q9Y2Y6 226 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 PPIL1Q9Y3C6 166 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 PCDHGC4Q9Y5F7 938 aa13.79□□□□□ -0.2
SPCS3-204ENST00000513139 PCDHGA9Q9Y5G4 932 aaKnown RBP13.79□□□□□ -0.2
SPCS3-204ENST00000513139 DIDO1Q9BTC0 2240 aaKnown RBP13.78□□□□□ -0.2
SPCS3-204ENST00000513139 KIR2DS5A0A0G2JLQ3 304 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 A0A0G2JNG1 304 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 A0A1B0GTH6 734 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 NPIPB15A6NHN6 443 aaPredicted RBP13.78□□□□□ -0.2
SPCS3-204ENST00000513139 LILRA5A6NI73 299 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 OR5K4A6NMS3 321 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 C21orf140B9A014 251 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 KIR2DS3K7RE56 304 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 MT-ND3P03897 115 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 CALB1P05937 261 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 CCNYL3P0C7X3 344 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 HSPA9P38646 679 aaKnown RBP13.78□□□□□ -0.2
SPCS3-204ENST00000513139 NSFP46459 744 aaKnown RBP13.78□□□□□ -0.2
SPCS3-204ENST00000513139 PGDP52209 483 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 FOXM1Q08050 763 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 LBRQ14739 615 aaKnown RBP13.78□□□□□ -0.2
SPCS3-204ENST00000513139 KIR2DS5Q14953 304 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 NR1I3Q14994 352 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 SYCP1Q15431 976 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 PAPD7Q5XG87 772 aaKnown RBP13.78□□□□□ -0.2
SPCS3-204ENST00000513139 ZNF765Q7L2R6 523 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 TMEM135Q86UB9 458 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 PHF13Q86YI8 300 aaPredicted RBP13.78□□□□□ -0.2
SPCS3-204ENST00000513139 ARHGAP12Q8IWW6 846 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 PDCD6IPQ8WUM4 868 aaKnown RBP13.78□□□□□ -0.2
SPCS3-204ENST00000513139 AP2M1Q96CW1 435 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 COX14Q96I36 57 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 C9orf72Q96LT7 481 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 ANP32EQ9BTT0 268 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 IFNKQ9P0W0 207 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 VPS18Q9P253 973 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 KLHL3Q9UH77 587 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 PADI1Q9ULC6 663 aa13.78□□□□□ -0.2
SPCS3-204ENST00000513139 CSMD1Q96PZ7 3565 aa13.77□□□□□ -0.2
SPCS3-204ENST00000513139 TCRBV5S1A1TA0A578 114 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 A6NCN8 305 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 EEF2KO00418 725 aaKnown RBP13.77□□□□□ -0.21
SPCS3-204ENST00000513139 DNAJB5O75953 348 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 GFPT2O94808 682 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 KIAA0754O94854 1291 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 NDUFA10O95299 355 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 F3P13726 295 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 DESP17661 470 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms