RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ZNF761Q86XN6 746 aaPredicted RBP16.61■□□□□ 0.25
PDLIM7-215ENST00000506161 KATNAL2Q8IYT4 538 aa16.61■□□□□ 0.25
PDLIM7-215ENST00000506161 OXNAD1Q96HP4 312 aaPredicted RBP16.61■□□□□ 0.25
PDLIM7-215ENST00000506161 MRFAP1L1Q96HT8 127 aa16.61■□□□□ 0.25
PDLIM7-215ENST00000506161 TEKT5Q96M29 485 aa16.61■□□□□ 0.25
PDLIM7-215ENST00000506161 NUDT22Q9BRQ3 303 aa16.61■□□□□ 0.25
PDLIM7-215ENST00000506161 HEMGNQ9BXL5 484 aa16.61■□□□□ 0.25
PDLIM7-215ENST00000506161 SEMA6CQ9H3T2 930 aa16.61■□□□□ 0.25
PDLIM7-215ENST00000506161 RDH14Q9HBH5 336 aa16.61■□□□□ 0.25
PDLIM7-215ENST00000506161 EPB41L5Q9HCM4 733 aa16.61■□□□□ 0.25
PDLIM7-215ENST00000506161 KCTD5Q9NXV2 234 aa16.61■□□□□ 0.25
PDLIM7-215ENST00000506161 RPL26L1Q9UNX3 145 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-215ENST00000506161 SDK2Q58EX2 2172 aa16.61■□□□□ 0.25
PDLIM7-215ENST00000506161 CFAP46Q8IYW2 2715 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 TRBV23OR9-2A0A075B6M9 112 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 CCDC187A0A096LP49 1063 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 PDE2AO00408 941 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 PPP1R12AO14974 1030 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 PMPCBO75439 489 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 ITIH1P19827 911 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 ACTR1BP42025 376 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 ACTR1AP61163 376 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 ZFP36L1Q07352 338 aaKnown RBP16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 C11orf63Q6NUN7 778 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 IGF2-ASQ6U949 168 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 GPR155Q7Z3F1 870 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 ZNF438Q7Z4V0 828 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 TMC3Q7Z5M5 1100 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 SLITRK4Q8IW52 837 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 NRSN1Q8IZ57 195 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 ZNF567Q8N184 647 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 LIN37Q96GY3 246 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 ZNF578Q96N58 590 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 FAM118BQ9BPY3 351 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 GSDMCQ9BYG8 508 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 TMEM9Q9P0T7 183 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 TRIM10Q9UDY6 481 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 ZNF711Q9Y462 761 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 PCDHGA8Q9Y5G5 932 aa16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 EPN1Q9Y6I3 576 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-215ENST00000506161 A0A0A6YYK5 440 aaPredicted RBP16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 GPR39O43194 453 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 NUDT21O43809 227 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 TNFSF15O95150 251 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 ASMTLO95671 621 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 ZFXP17010 805 aaPredicted RBP16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 NFKBIAP25963 317 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 CSF2RBP32927 897 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 UGT1A5P35504 534 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 INHBCP55103 352 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 PCBP4P57723 403 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 CDK18Q07002 472 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 ILF3Q12906 894 aaKnown RBP eCLIP16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 SRSF6Q13247 344 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 OLIG2Q13516 323 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 NR1D2Q14995 579 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 C16orf72Q14CZ0 275 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 TFDP3Q5H9I0 405 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 NKAIN2Q5VXU1 208 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 PCSK4Q6UW60 755 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 CCDC170Q8IYT3 715 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 NDUFAF2Q8N183 169 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 EXD1Q8NHP7 514 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 WDR36Q8NI36 951 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 ALG3Q92685 438 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 MRGPRX2Q96LB1 330 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 PANX2Q96RD6 677 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 FAM83DQ9H4H8 585 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 CPNE5Q9HCH3 593 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 ADGRG1Q9Y653 693 aa16.59■□□□□ 0.25
PDLIM7-215ENST00000506161 MTX2O75431 263 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 PNLIPP16233 465 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 ZNF8P17098 575 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 BPIP17213 487 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 CA4P22748 312 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 CCKBRP32239 447 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 ERVPABLB-1P60509 514 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 AMZ1Q400G9 498 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 USP53Q70EK8 1073 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 CLEC14AQ86T13 490 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 TTC30BQ8N4P2 665 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 WDR48Q8TAF3 677 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 SLC37A2Q8TED4 501 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 TFB1MQ8WVM0 346 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 PMEPA1Q969W9 287 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 QKIQ96PU8 341 aaKnown RBP eCLIP16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 CLMPQ9H6B4 373 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 ZFYVE1Q9HBF4 777 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 BPIFA1Q9NP55 256 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 PKD2L2Q9NZM6 624 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 ATXN10Q9UBB4 475 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 KCNK6Q9Y257 313 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 SSUH2Q9Y2M2 353 aa16.58■□□□□ 0.24
PDLIM7-215ENST00000506161 LOC285095A0A1B0GVY8 99 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 GRID2IPA4D2P6 1211 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 A6NCN8 305 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 ARHGAP6O43182 974 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 ZRANB2O95218 330 aaKnown RBP eCLIP16.57■□□□□ 0.242e-6■■■□□ 18.6
PDLIM7-215ENST00000506161 NDST3O95803 873 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 RBL1P28749 1068 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms