RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 TBC1D3GQ6DHY5 549 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 TBC1D3CQ6IPX1 549 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 ADGRD1Q6QNK2 874 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 CERS6Q6ZMG9 384 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 CAPN12Q6ZSI9 719 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 RFLNAQ6ZTI6 216 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 WDR5BQ86VZ2 330 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 LRRC6Q86X45 466 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 TDRPQ86YL5 185 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 CILP2Q8IUL8 1156 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 C1orf210Q8IVY1 113 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 MAML2Q8IZL2 1156 aaPredicted RBP7.16□□□□□ -1.26
NUP54-204ENST00000506098 TBC1D3Q8IZP1 549 aaPredicted RBP7.16□□□□□ -1.26
NUP54-204ENST00000506098 DTWD2Q8NBA8 298 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 TP53I13Q8NBR0 393 aaPredicted RBP7.16□□□□□ -1.26
NUP54-204ENST00000506098 DENND6BQ8NEG7 585 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 CADM4Q8NFZ8 388 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 OR6P1Q8NGX9 317 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 ZNF398Q8TD17 642 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 GANCQ8TET4 914 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 SLC44A1Q8WWI5 657 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 CDKL2Q92772 493 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 NELL1Q92832 810 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 SCAMP4Q969E2 229 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 CENPTQ96BT3 561 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 NUS1Q96E22 293 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 ZIM3Q96PE6 472 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 KLF6Q99612 283 aaPredicted RBP7.16□□□□□ -1.26
NUP54-204ENST00000506098 CCDC77Q9BR77 488 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 FAM167BQ9BTA0 163 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 FAM126AQ9BYI3 521 aaPredicted RBP7.16□□□□□ -1.26
NUP54-204ENST00000506098 SLC17A9Q9BYT1 436 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 TPSD1Q9BZJ3 242 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 EPHX3Q9H6B9 360 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 IARS2Q9NSE4 1012 aaKnown RBP7.16□□□□□ -1.26
NUP54-204ENST00000506098 CATSPERZQ9NTU4 200 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 INTS10Q9NVR2 710 aaKnown RBP7.16□□□□□ -1.26
NUP54-204ENST00000506098 SPATA6Q9NWH7 488 aaPredicted RBP7.16□□□□□ -1.26
NUP54-204ENST00000506098 SMOXQ9NWM0 555 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 EURLQ9NYK6 297 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 IL1RAPL1Q9NZN1 696 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 ZFATQ9P243 1243 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 SLC24A2Q9UI40 661 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 ZNF180Q9UJW8 692 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 FBXO4Q9UKT5 387 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 CYP8B1Q9UNU6 501 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 PLAAQ9Y263 795 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 COQ6Q9Y2Z9 468 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 SLC30A1Q9Y6M5 507 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 PCDH15Q96QU1 1955 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 MDC1Q14676 2089 aaKnown RBP7.16□□□□□ -1.26
NUP54-204ENST00000506098 GOLGA4Q13439 2230 aaKnown RBP7.16□□□□□ -1.26
NUP54-204ENST00000506098 A0A0C4DFX4 3053 aa7.16□□□□□ -1.26
NUP54-204ENST00000506098 IGLV3-16A0A075B6K0 115 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 EXOC1LA0A1B0GW35 172 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 OR51F1A6NGY5 319 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 FADS2P1A8MWK0 482 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 TNFRSF10AO00220 468 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 TOR1BO14657 336 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 LAMTOR5O43504 91 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 PRAMEF1O95521 474 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 S1PR4O95977 384 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 PAK4O96013 591 aaPredicted RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 SLC4A1P02730 911 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 AHSGP02765 367 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 IVLP07476 585 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 HOXC4P09017 264 aaPredicted RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 ITGALP20701 1170 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 GABRB3P28472 473 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 AVPR2P30518 371 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 PPARGP37231 505 aaPredicted RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 SLC1A2P43004 574 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 MAGEA8P43361 318 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 TTPAP49638 278 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 CDKN1CP49918 316 aaPredicted RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 ADARP55265 1226 aaKnown RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 PPP2CBP62714 309 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 PPP2CAP67775 309 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 IRX1P78414 480 aaPredicted RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 SGCGQ13326 291 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 THOC5Q13769 683 aaKnown RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 SEMA3AQ14563 771 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 EFTUD2Q15029 972 aaKnown RBP eCLIP7.15□□□□□ -1.26
NUP54-204ENST00000506098 LRRC14Q15048 493 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 CHRNA6Q15825 494 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 WSCD2Q2TBF2 565 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 ZNF528Q3MIS6 628 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 ATP13A5Q4VNC0 1218 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 USP39Q53GS9 565 aaKnown RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 ZRANB3Q5FWF4 1079 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 AARS2Q5JTZ9 985 aaKnown RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 TMEM31Q5JXX7 168 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 GRTP1Q5TC63 336 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 SEL1L3Q68CR1 1132 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 KIAA0895LQ68EN5 471 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 MRNIPQ6NTE8 343 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 PSAPL1Q6NUJ1 521 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 PNCKQ6P2M8 343 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 FAM151BQ6UXP7 276 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 SLC36A4Q6YBV0 504 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms