RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 NOC3LQ8WTT2 800 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 WASF1Q92558 559 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 RSC1A1Q92681 617 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 SH3KBP1Q96B97 665 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 CCDC127Q96BQ5 260 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ZNF501Q96CX3 271 aaPredicted RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 DNAJC19Q96DA6 116 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 CALML4Q96GE6 196 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 BTN2A3PQ96KV6 586 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 MAGEB10Q96LZ2 347 aaPredicted RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 GPR137Q96N19 417 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 TGM7Q96PF1 710 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 SECISBP2Q96T21 854 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 NT5C1AQ9BXI3 368 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 TEX101Q9BY14 249 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 TM6SF2Q9BZW4 377 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ZMYND15Q9H091 742 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 EPB41L1Q9H4G0 881 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 SUDS3Q9H7L9 328 aaPredicted RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 UPF2Q9HAU5 1272 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 BRMS1Q9HCU9 246 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 SLC6A20Q9NP91 592 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ANLNQ9NQW6 1124 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 CNGB3Q9NQW8 809 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 PCMTD2Q9NV79 361 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 CRIM1Q9NZV1 1036 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 TBC1D7Q9P0N9 293 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 RARRES3Q9UL19 164 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 RNF6Q9Y252 685 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 SLC17A4Q9Y2C5 497 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 FCF1Q9Y324 198 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ASB1Q9Y576 335 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 A0A087X1B8 175 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 TSPAN11A1L157 253 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 LRRIQ3A6PVS8 624 aaPredicted RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 EIF3DO15371 548 aaKnown RBP eCLIP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 TGFB1I1O43294 461 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 ARHGEF9O43307 516 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 PFKFB2O60825 505 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 DNAJC6O75061 913 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 TBCAO75347 108 aaKnown RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 SCRG1O75711 98 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 CDKL5O76039 1030 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 RECQL5O94762 991 aaPredicted RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 CNOT4O95628 575 aaKnown RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 JCHAINP01591 159 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 LTFP02788 710 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 IVLP07476 585 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 KELP23276 732 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 PSMA5P28066 241 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 CHRNB4P30926 498 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 SOX11P35716 441 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 GGCXP38435 758 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 MMP12P39900 470 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 HADHAP40939 763 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 MAPK9P45984 424 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 NASPP49321 788 aaPredicted RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 LIG3P49916 1009 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 RAD23BP54727 409 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 GSDMDP57764 484 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 DLG4P78352 724 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 RBPJQ06330 500 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 DMTNQ08495 405 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 MFAP5Q13361 173 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 BIRC2Q13490 618 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 AUHQ13825 339 aaKnown RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 SSPNQ14714 243 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 PTCHD3Q3KNS1 767 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 PRR31Q5SQ13 230 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 C1orf220Q5T0J3 134 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 ZFYVE27Q5T4F4 411 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 AGAP7PQ5VUJ5 663 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 PRAMEF13Q5VWM6 474 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 PNCKQ6P2M8 343 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 CPLX2Q6PUV4 134 aaKnown RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 NAPRTQ6XQN6 538 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 RUFY3Q7L099 469 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 YTHDF3Q7Z739 585 aaKnown RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 TTC7BQ86TV6 843 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 BPHLQ86WA6 291 aaPredicted RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 SKAP1Q86WV1 359 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 SIAH3Q8IW03 269 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 SYTL1Q8IYJ3 562 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 OR7D4Q8NG98 312 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 GOT1L1Q8NHS2 421 aaPredicted RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 SGMS2Q8NHU3 365 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 PSMF1Q92530 271 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 ZNF592Q92610 1267 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 RAD54LQ92698 747 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 ISG20Q96AZ6 181 aaKnown RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 ZNF514Q96K75 400 aaPredicted RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 NSMCE3Q96MG7 304 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 SERPINB11Q96P15 392 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 AGAP4Q96P64 663 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 IP6K3Q96PC2 410 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 LMF1Q96S06 567 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 TRIM51Q9BSJ1 452 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 MLPHQ9BV36 600 aaPredicted RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 C2orf49Q9BVC5 232 aaPredicted RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 RAB34Q9BZG1 259 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms