RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 SUSD2Q9UGT4 822 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 CHMP2BQ9UQN3 213 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 PCDHGA5Q9Y5G8 931 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 OAS3Q9Y6K5 1087 aaKnown RBP13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 PI4KAP42356 2102 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 EPG5Q9HCE0 2579 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 TMEM202A6NGA9 273 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 PRR5-ARHGAP8B1AHC4 643 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 GOLGA8KD6RF30 607 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 GOLGA8TH3BQL2 631 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 PPFIA2O75334 1257 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 MTX2O75431 263 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 KRT37O76014 449 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 SRP72O76094 671 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 PRAMEF1O95521 474 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 GOT2P00505 430 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 F7P08709 466 aaPredicted RBP13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 TSHRP16473 764 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 PSMA3P25788 255 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 TRIM23P36406 574 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 RABIFP47224 123 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 NXPH1P58417 271 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 CDK3Q00526 305 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 HLTFQ14527 1009 aaKnown RBP eCLIP13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 TCEA2Q15560 299 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 ANKRD20A4Q4UJ75 823 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 KHDC1Q4VXA5 237 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 ZRANB3Q5FWF4 1079 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 ENPP7Q6UWV6 458 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 ADAMTSL4Q6UY14 1074 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 NLRP8Q86W28 1048 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 UNC5BQ8IZJ1 945 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 PDIK1LQ8N165 341 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 OR6P1Q8NGX9 317 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 ZNF398Q8TD17 642 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 CCDC97Q96F63 343 aaPredicted RBP13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 PLEKHG4BQ96PX9 1271 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 EBNA1BP2Q99848 306 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 TEX101Q9BY14 249 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 ASB8Q9H765 288 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 WDR26Q9H7D7 661 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 MRM3Q9HC36 420 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 CAPN10Q9HC96 672 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 SAYSD1Q9NPB0 183 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 MRPL40Q9NQ50 206 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 GDF3Q9NR23 364 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 FAM114A2Q9NRY5 505 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 TREX1Q9NSU2 369 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 KCTD5Q9NXV2 234 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 NFKBIL1Q9UBC1 381 aaPredicted RBP13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 MOSPD1Q9UJG1 213 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 PNMA8BQ9ULN7 279 aaPredicted RBP13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 SLC6A14Q9UN76 642 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 PLXNB3Q9ULL4 1909 aa13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 KMT2BQ9UMN6 2715 aaPredicted RBP13.17□□□□□ -0.3
PDLIM7-212ENST00000504380 ZNF106Q9H2Y7 1883 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 TP53BP1Q12888 1972 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 CACNA1BQ00975 2339 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 SMAPO00193 183 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 CACNB4O00305 520 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 KHNYNO15037 678 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 VAPBO95292 243 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 ASMTLO95671 621 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 ARNTP27540 789 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 ECHS1P30084 290 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 HADHAP40939 763 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 THOP1P52888 689 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 ACVR1Q04771 509 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 GRIK2Q13002 908 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 EIF2B5Q13144 721 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 LAMB3Q13751 1172 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 FZD2Q14332 565 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 SEMA3AQ14563 771 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 NFATC4Q14934 902 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 PSAPL1Q6NUJ1 521 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 SLC23A3Q6PIS1 610 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 CAPN12Q6ZSI9 719 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 MARK2Q7KZI7 788 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 TAS2R42Q7RTR8 314 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 RD3Q7Z3Z2 195 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 LDB1Q86U70 411 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 RAVER1Q8IY67 606 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 GSPT2Q8IYD1 628 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 PIANPQ8IYJ0 282 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 FBXO36Q8NEA4 188 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 CEP76Q8TAP6 659 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 BTN2A2Q8WVV5 523 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 OR1E3Q8WZA6 343 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 GLYATL1Q969I3 302 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 TSACCQ96A04 125 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 HIC2Q96JB3 615 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 ZSCAN5AQ9BUG6 496 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 GTPBP2Q9BX10 602 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 FRMD8Q9BZ67 464 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 TCEAL2Q9H3H9 227 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 IL21RQ9HBE5 538 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 PLAC1Q9HBJ0 212 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 PHPT1Q9NRX4 125 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 RXFP3Q9NSD7 469 aa13.16□□□□□ -0.3
PDLIM7-212ENST00000504380 MARCH4Q9P2E8 410 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms