RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 TSGA10Q9BZW7 698 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 SLC7A5P2Q9GIP4 190 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 DNAI2Q9GZS0 605 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 NSRP1Q9H0G5 558 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 CLSTN2Q9H4D0 955 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 SYNCQ9H7C4 482 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 MVB12BQ9H7P6 319 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 PPCSQ9HAB8 311 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 PARVGQ9HBI0 331 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZNF334Q9HCZ1 680 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 WDR6Q9NNW5 1121 aaKnown RBP2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZNF224Q9NZL3 707 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 OR6C3Q9NZP0 311 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 CHMP5Q9NZZ3 219 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 TBC1D7Q9P0N9 293 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 LUZP4Q9P127 313 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 STK39Q9UEW8 545 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 TEKT2Q9UIF3 430 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 DUSP12Q9UNI6 340 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 AGTPBP1Q9UPW5 1226 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 RCE1Q9Y256 329 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 VDAC3Q9Y277 283 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 TRIM17Q9Y577 477 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCDC171Q6TFL3 1326 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 ROCK1Q13464 1354 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 MAP3K5Q99683 1374 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 NPC1L1Q9UHC9 1359 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 YEATS2Q9ULM3 1422 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 NCOA3Q9Y6Q9 1424 aa2.06□□□□□ -2.08
HMGB3P17-201ENST00000504195 LINC00854A0A1B0GVQ3 168 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 TRIM64A6NGJ6 449 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 TRIM64BA6NI03 449 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 ENO4A6NNW6 628 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 AKR1B15C9JRZ8 316 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 E9PMD0 336 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 EIF3FO00303 357 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 YKT6O15498 198 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 FFAR2O15552 330 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SEPT4O43236 478 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SULT1B1O43704 296 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 AHCYL1O43865 530 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 HBP1O60381 514 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 NMT2O60551 498 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 PLOD3O60568 738 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 TSPAN1O60635 241 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZNF254O75437 659 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 B3GALNT1O75752 331 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 PALMO75781 387 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 ERLIN2O94905 339 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SLITRK3O94933 977 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 KDM4BO94953 1096 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 FGFR1OPO95684 399 aaKnown RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 APBB3O95704 486 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 IVLP07476 585 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CYP21A2P08686 494 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 IFIT2P09913 472 aaKnown RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 TROVE2P10155 538 aaKnown RBP eCLIP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 DLATP10515 647 aaKnown RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 TFPIP10646 304 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 P4HA1P13674 534 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 ARSAP15289 507 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CHN1P15882 459 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 STMN1P16949 149 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 AVPR2P30518 371 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 HPDP32754 393 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 IL15P40933 162 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 MCM2P49736 904 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SLC8A3P57103 927 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 TMF1P82094 1093 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 AKAP17AQ02040 695 aaKnown RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 UBXN1Q04323 297 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 RELQ04864 619 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 BTKQ06187 659 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CAPSQ13938 189 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 DPYSQ14117 519 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 PTK2BQ14289 1009 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 NFE2L1Q14494 772 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SPCS2Q15005 226 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 PSMD6Q15008 389 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 WDR43Q15061 677 aaKnown RBP eCLIP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 ANKRD1Q15327 319 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 TOMM20Q15388 145 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 PPP1R7Q15435 360 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 TMEM30BQ3MIR4 351 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCDC38Q502W7 563 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CAVIN4Q5BKX8 364 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 KCNT1Q5JUK3 1230 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 FAM83BQ5T0W9 1011 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 FAM122CQ6P4D5 195 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 KLHL17Q6TDP4 642 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 C16orf54Q6UWD8 224 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 UNC5DQ6UXZ4 953 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 GBP6Q6ZN66 633 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 RASGRP2Q7LDG7 609 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 MAATS1Q7Z4T9 603 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 MFN1Q8IWA4 741 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCDC117Q8IWD4 279 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCDC83Q8IWF9 413 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 RPAP2Q8IXW5 612 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SPICE1Q8N0Z3 855 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms