RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TMEM63AO94886 807 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 HADHAP40939 763 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 GRK6P43250 576 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 DR1Q01658 176 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 PUM1Q14671 1186 aaKnown RBP eCLIP24.92■■□□□ 1.58
LSM6-202ENST00000502781 CHRNA6Q15825 494 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 TRIM74Q86UV6 250 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 JAMLQ86YT9 394 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 HID1Q8IV36 788 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 MCUQ8NE86 351 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 BAHD1Q8TBE0 780 aaPredicted RBP24.92■■□□□ 1.58
LSM6-202ENST00000502781 STYXQ8WUJ0 223 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 SLC13A1Q9BZW2 595 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 MRPL40Q9NQ50 206 aaKnown RBP24.92■■□□□ 1.58
LSM6-202ENST00000502781 NLE1Q9NVX2 485 aaPredicted RBP24.92■■□□□ 1.58
LSM6-202ENST00000502781 FKBPLQ9UIM3 349 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 APPL1Q9UKG1 709 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 PCOLCE2Q9UKZ9 415 aa24.92■■□□□ 1.58
LSM6-202ENST00000502781 OAS3Q9Y6K5 1087 aaKnown RBP24.92■■□□□ 1.58
LSM6-202ENST00000502781 PCNX2A6NKB5 2137 aa24.91■■□□□ 1.58
LSM6-202ENST00000502781 HEATR9A2RTY3 570 aa24.91■■□□□ 1.58
LSM6-202ENST00000502781 H7C0S8 307 aa24.91■■□□□ 1.58
LSM6-202ENST00000502781 IVLP07476 585 aa24.91■■□□□ 1.58
LSM6-202ENST00000502781 ADRA1DP25100 572 aa24.91■■□□□ 1.58
LSM6-202ENST00000502781 DHX34Q14147 1143 aaKnown RBP24.91■■□□□ 1.58
LSM6-202ENST00000502781 FAM151BQ6UXP7 276 aa24.91■■□□□ 1.58
LSM6-202ENST00000502781 NAT8LQ8N9F0 302 aa24.91■■□□□ 1.58
LSM6-202ENST00000502781 PTCD2Q8WV60 388 aaKnown RBP24.91■■□□□ 1.58
LSM6-202ENST00000502781 DNAJC1Q96KC8 554 aaKnown RBP24.91■■□□□ 1.58
LSM6-202ENST00000502781 SMOXQ9NWM0 555 aa24.91■■□□□ 1.58
LSM6-202ENST00000502781 SPASTQ9UBP0 616 aa24.91■■□□□ 1.58
LSM6-202ENST00000502781 TMEM98Q9Y2Y6 226 aa24.91■■□□□ 1.58
LSM6-202ENST00000502781 LRP4O75096 1905 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 AGAP14A8MT82 685 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 SCAMP1O15126 338 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 AQP9O43315 295 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 POLD2P49005 469 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 NPY2RP49146 381 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 PEX6Q13608 980 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 LAMB3Q13751 1172 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 SEPT6Q14141 434 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 PRRT3Q5FWE3 981 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 RNASEH2BQ5TBB1 312 aaKnown RBP24.9■■□□□ 1.58
LSM6-202ENST00000502781 KRT12Q99456 494 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 CLPBQ9H078 707 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 CYP4F12Q9HCS2 524 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 ASIC3Q9UHC3 531 aa24.9■■□□□ 1.58
LSM6-202ENST00000502781 TTI1O43156 1089 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 URI1O94763 535 aaPredicted RBP24.89■■□□□ 1.57
LSM6-202ENST00000502781 SLC25A14O95258 325 aaPredicted RBP24.89■■□□□ 1.57
LSM6-202ENST00000502781 PRAMEF1O95521 474 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 TNFP01375 233 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 MLNP12872 115 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 CA5AP35218 305 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 ADCY8P40145 1251 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 ID4P47928 161 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 ACVR1Q04771 509 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 ITGA9Q13797 1035 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 INAVAQ3KP66 663 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 CCDC38Q502W7 563 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 RD3Q7Z3Z2 195 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 CAND1Q86VP6 1230 aaKnown RBP24.89■■□□□ 1.57
LSM6-202ENST00000502781 PHYKPLQ8IUZ5 450 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 FSTL5Q8N475 847 aaPredicted RBP24.89■■□□□ 1.57
LSM6-202ENST00000502781 ZNF398Q8TD17 642 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 PEX13Q92968 403 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 CAMK1GQ96NX5 476 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 IL22Q9GZX6 179 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 TRIM39Q9HCM9 518 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 BFARQ9NZS9 450 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 SUFUQ9UMX1 484 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 TCAF1Q9Y4C2 921 aa24.89■■□□□ 1.57
LSM6-202ENST00000502781 MYLKQ15746 1914 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 NEMP2A6NFY4 417 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 DNALI1O14645 258 aaPredicted RBP24.88■■□□□ 1.57
LSM6-202ENST00000502781 GPR39O43194 453 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 UGT1A9O60656 530 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 DNAJC6O75061 913 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 SRP72O76094 671 aaKnown RBP24.88■■□□□ 1.57
LSM6-202ENST00000502781 UGT1A6P19224 532 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 UGT1A1P22309 533 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 UGT1A4P22310 534 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 UGT1A3P35503 534 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 UGT1A5P35504 534 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 TERF1P54274 439 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 SESN2P58004 480 aaPredicted RBP24.88■■□□□ 1.57
LSM6-202ENST00000502781 SARNPP82979 210 aaKnown RBP24.88■■□□□ 1.57
LSM6-202ENST00000502781 SKIDA1Q1XH10 827 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 PCID2Q5JVF3 399 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 ARMC3Q5W041 872 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 DOK6Q6PKX4 331 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 NLRP9Q7RTR0 991 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 PPIL6Q8IXY8 311 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 SDR16C5Q8N3Y7 309 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 DEFB124Q8NES8 71 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 OR13J1Q8NGT2 312 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 OR4C6Q8NH72 309 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 LMX1AQ8TE12 382 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 RHBDD1Q8TEB9 315 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 SETD7Q8WTS6 366 aaKnown RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms