RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 CLGNO14967 610 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 CCL16O15467 120 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 MAP3K13O43283 966 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 NRP2O60462 931 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 SRP72O76094 671 aaKnown RBP12.39□□□□□ -0.43
AFF3-215ENST00000498090 GLP2RO95838 553 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 CLPTM1O96005 669 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 LRG1P02750 347 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 FAM58BPP0C7Q3 252 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 FDXRP22570 491 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 SLC7A1P30825 629 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 DPP6P42658 865 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 NRIP1P48552 1158 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 KCNC3Q14003 757 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 GRIN2CQ14957 1233 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 AGKQ53H12 422 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 COQ5Q5HYK3 327 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 MS4A13Q5J8X5 152 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 AP1ARQ63HQ0 302 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 C8orf82Q6P1X6 216 aaPredicted RBP12.39□□□□□ -0.43
AFF3-215ENST00000498090 LARP4Q71RC2 724 aaKnown RBP eCLIP12.39□□□□□ -0.43
AFF3-215ENST00000498090 BBS5Q8N3I7 341 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 SPATA6LQ8N4H0 392 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 TMEM102Q8N9M5 508 aaPredicted RBP12.39□□□□□ -0.43
AFF3-215ENST00000498090 TSPEARQ8WU66 669 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 NAT14Q8WUY8 206 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 MOCOSQ96EN8 888 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 NDNQ99608 321 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 POLR1EQ9GZS1 481 aaKnown RBP12.39□□□□□ -0.43
AFF3-215ENST00000498090 ATXN3LQ9H3M9 355 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 TFB2MQ9H5Q4 396 aaKnown RBP12.39□□□□□ -0.43
AFF3-215ENST00000498090 CCSER2Q9H7U1 834 aa12.39□□□□□ -0.43
AFF3-215ENST00000498090 TLR8Q9NR97 1041 aaKnown RBP12.39□□□□□ -0.43
AFF3-215ENST00000498090 MYO18AQ92614 2054 aaKnown RBP12.39□□□□□ -0.43
AFF3-215ENST00000498090 TMEM265A0A087WTH1 108 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 TCRBV3S1A0A5B6 114 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 ZNF840PA6NDX5 716 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 MRASO14807 208 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 RAMP2O60895 175 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 F11P03951 625 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 MMP2P08253 660 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 RING1Q06587 406 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 SLC10A7Q0GE19 358 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 MAP7D1Q3KQU3 841 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 SIRPB2Q5JXA9 342 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 GK5Q6ZS86 529 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 EFL1Q7Z2Z2 1120 aaKnown RBP12.38□□□□□ -0.43
AFF3-215ENST00000498090 ISCA2Q86U28 154 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 RNF135Q8IUD6 432 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 OR6P1Q8NGX9 317 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 ARRDC2Q8TBH0 407 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 OVCA2Q8WZ82 227 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 HDAC10Q969S8 669 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.38□□□□□ -0.43
AFF3-215ENST00000498090 PABPC5Q96DU9 382 aaKnown RBP12.38□□□□□ -0.43
AFF3-215ENST00000498090 C19orf60Q96EN9 201 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 PRICKLE1Q96MT3 831 aaPredicted RBP12.38□□□□□ -0.43
AFF3-215ENST00000498090 PKP2Q99959 881 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 HAUS8Q9BT25 410 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 OSBPL11Q9BXB4 747 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 SYTL2Q9HCH5 934 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 CYP4F12Q9HCS2 524 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 PFDN4Q9NQP4 134 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 C8orf4Q9NR00 106 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 INTS10Q9NVR2 710 aaKnown RBP12.38□□□□□ -0.43
AFF3-215ENST00000498090 TMEM45AQ9NWC5 275 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 HCFC1R1Q9NWW0 138 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 TMEM181Q9P2C4 612 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 CD300AQ9UGN4 299 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 TMCO1Q9UM00 188 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 NDUFAF1Q9Y375 327 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 PRUNE2Q8WUY3 3088 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 ARHGAP10A1A4S6 786 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 NEMP2A6NFY4 417 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 E7ENX8 843 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 AURKAO14965 403 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 LDB2O43679 373 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 RPP40O75818 363 aaKnown RBP12.38□□□□□ -0.43
AFF3-215ENST00000498090 SUPT7LO94864 414 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 TBX18O95935 607 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 ATXN1LP0C7T5 689 aaKnown RBP12.38□□□□□ -0.43
AFF3-215ENST00000498090 HOXA9P31269 272 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 MRPL19P49406 292 aaKnown RBP12.38□□□□□ -0.43
AFF3-215ENST00000498090 FOXM1Q08050 763 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 GRIK2Q13002 908 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 SERINC3Q13530 473 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 POLD3Q15054 466 aaPredicted RBP12.38□□□□□ -0.43
AFF3-215ENST00000498090 TCEAL5Q5H9L2 206 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 ZNF697Q5TEC3 545 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 ALG1LQ6GMV1 187 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 BORAQ6PGQ7 559 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 PTAR1Q7Z6K3 402 aaPredicted RBP12.38□□□□□ -0.43
AFF3-215ENST00000498090 ITIH5Q86UX2 942 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 LILRA2Q8N149 483 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 PDZD8Q8NEN9 1154 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 BRSK1Q8TDC3 778 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 ZUFSPQ96AP4 578 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 EME1Q96AY2 570 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 ZNF707Q96C28 371 aaPredicted RBP12.38□□□□□ -0.43
AFF3-215ENST00000498090 MARK4Q96L34 752 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms