RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 FADS2P1A8MWK0 482 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 MYO1FO00160 1098 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 SLC28A2O43868 658 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 ATP1A1P05023 1023 aaKnown RBP18.4■□□□□ 0.54
PRKCB-209ENST00000498058 MMP2P08253 660 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 FAM87AP0C7U9 286 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 ZNF30P17039 623 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 CCNCP24863 283 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 CLPPQ16740 277 aaPredicted RBP18.4■□□□□ 0.54
PRKCB-209ENST00000498058 CCDC122Q5T0U0 273 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 OR4D9Q8NGE8 314 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 ZNF564Q8TBZ8 553 aaPredicted RBP18.4■□□□□ 0.54
PRKCB-209ENST00000498058 NKD1Q969G9 470 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 FAF2Q96CS3 445 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 TSGA13Q96PP4 275 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 CHP1Q99653 195 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 PACSIN1Q9BY11 444 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 B3GNT4Q9C0J1 378 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 CDH19Q9H159 772 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 KCNK4Q9NYG8 393 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 SEPT10Q9P0V9 454 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 B3GALT1Q9Y5Z6 326 aa18.4■□□□□ 0.54
PRKCB-209ENST00000498058 CYSRT1A8MQ03 144 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 ITGB2P05107 769 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 CD82P27701 267 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 EPHB1P54762 984 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 CLCA4Q14CN2 919 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 SLC18A3Q16572 532 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 IFI16Q16666 785 aaKnown RBP18.39■□□□□ 0.53
PRKCB-209ENST00000498058 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.39■□□□□ 0.53
PRKCB-209ENST00000498058 SFRP1Q8N474 314 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 LPCAT1Q8NF37 534 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 ART4Q93070 314 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 EID2BQ96D98 161 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 TAAR9Q96RI9 348 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 LYSMD1Q96S90 227 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 PCDH9Q9HC56 1237 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 TTLL3Q9Y4R7 772 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 PCDHGA3Q9Y5H0 932 aa18.39■□□□□ 0.53
PRKCB-209ENST00000498058 TLN1Q9Y490 2541 aaKnown RBP18.38■□□□□ 0.53
PRKCB-209ENST00000498058 ARHGAP6O43182 974 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 PROSCO94903 275 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 ASMTLO95671 621 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 FASLGP48023 281 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 BIRC2Q13490 618 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 TRA2AQ13595 282 aaKnown RBP eCLIP18.38■□□□□ 0.53
PRKCB-209ENST00000498058 SPA17Q15506 151 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 QPCTQ16769 361 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 HADHQ16836 314 aaKnown RBP18.38■□□□□ 0.53
PRKCB-209ENST00000498058 TIGD7Q6NT04 549 aaPredicted RBP18.38■□□□□ 0.53
PRKCB-209ENST00000498058 TMEM71Q6P5X7 295 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 GALNT13Q8IUC8 556 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 NRSN1Q8IZ57 195 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 NDUFAF2Q8N183 169 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 TXLNBQ8N3L3 684 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 CNTD1Q8N815 330 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 BMPERQ8N8U9 685 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 KCTD6Q8NC69 237 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 EXD1Q8NHP7 514 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 RAPGEF5Q92565 580 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 FATE1Q969F0 183 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 ZNF670Q9BS34 389 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 SLC12A9Q9BXP2 914 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 STARD5Q9NSY2 213 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 PDP2Q9P2J9 529 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 TBC1D29Q9UFV1 150 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 PCDHB11Q9Y5F2 797 aa18.38■□□□□ 0.53
PRKCB-209ENST00000498058 A6NCN8 305 aa18.37■□□□□ 0.53
PRKCB-209ENST00000498058 UGT1A3P35503 534 aa18.37■□□□□ 0.53
PRKCB-209ENST00000498058 SPINT3P49223 89 aa18.37■□□□□ 0.53
PRKCB-209ENST00000498058 ASTE1Q2TB18 679 aaPredicted RBP18.37■□□□□ 0.53
PRKCB-209ENST00000498058 ZNF648Q5T619 568 aaPredicted RBP18.37■□□□□ 0.53
PRKCB-209ENST00000498058 HENMT1Q5T8I9 393 aaKnown RBP18.37■□□□□ 0.53
PRKCB-209ENST00000498058 TMEM164Q5U3C3 297 aa18.37■□□□□ 0.53
PRKCB-209ENST00000498058 AGBL5Q8NDL9 886 aa18.37■□□□□ 0.53
PRKCB-209ENST00000498058 TRIM4Q9C037 500 aa18.37■□□□□ 0.53
PRKCB-209ENST00000498058 BRD8Q9H0E9 1235 aa18.37■□□□□ 0.53
PRKCB-209ENST00000498058 ARFGAP3Q9NP61 516 aa18.37■□□□□ 0.53
PRKCB-209ENST00000498058 DTLQ9NZJ0 730 aa18.37■□□□□ 0.53
PRKCB-209ENST00000498058 AKAP7Q9P0M2 348 aaPredicted RBP18.37■□□□□ 0.53
PRKCB-209ENST00000498058 ZNHIT2Q9UHR6 403 aa18.37■□□□□ 0.53
PRKCB-209ENST00000498058 KCNK6Q9Y257 313 aa18.37■□□□□ 0.53
PRKCB-209ENST00000498058 EPN1Q9Y6I3 576 aaPredicted RBP18.37■□□□□ 0.53
PRKCB-209ENST00000498058 C1orf232A0A0U1RR37 186 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 SOWAHDA6NJG2 315 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 EFCAB7A8K855 629 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 A8MU76 341 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 STMND1H3BQB6 276 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 NDUFA10O95299 355 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 JCHAINP01591 159 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 LIFP15018 202 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 CES1P23141 567 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 CD86P42081 329 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 ZBTB17Q13105 803 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 PDK2Q15119 407 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 ANKS6Q68DC2 871 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 CHST15Q7LFX5 561 aaPredicted RBP18.36■□□□□ 0.53
PRKCB-209ENST00000498058 PRICKLE2Q7Z3G6 844 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 TMEM139Q8IV31 216 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 HDAC11Q96DB2 347 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms