RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 THOC5Q13769 683 aaKnown RBP13.48□□□□□ -0.25
CPNE1-227ENST00000498056 INPP5AQ14642 412 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 STAT4Q14765 748 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 ATP13A5Q4VNC0 1218 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 FASTKD1Q53R41 847 aaKnown RBP13.48□□□□□ -0.25
CPNE1-227ENST00000498056 UBAP2Q5T6F2 1119 aaKnown RBP13.48□□□□□ -0.25
CPNE1-227ENST00000498056 PSAPL1Q6NUJ1 521 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 PNCKQ6P2M8 343 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 DOK6Q6PKX4 331 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 KYAT3Q6YP21 454 aaKnown RBP13.48□□□□□ -0.25
CPNE1-227ENST00000498056 CCNI2Q6ZMN8 369 aaPredicted RBP13.48□□□□□ -0.25
CPNE1-227ENST00000498056 TAS2R42Q7RTR8 314 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 SNX20Q7Z614 316 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 OR4L1Q8NH43 312 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.48□□□□□ -0.25
CPNE1-227ENST00000498056 CENPTQ96BT3 561 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 TTC25Q96NG3 672 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 C19orf43Q9BQ61 176 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 ORAI3Q9BRQ5 295 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 ARFGAP3Q9NP61 516 aa13.48□□□□□ -0.25
CPNE1-227ENST00000498056 SMG5Q9UPR3 1016 aaKnown RBP13.48□□□□□ -0.25
CPNE1-227ENST00000498056 POM121BA6NF01 834 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 UGT1A9O60656 530 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 UGT1A6P19224 532 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 UGT1A1P22309 533 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 UGT1A4P22310 534 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 STX2P32856 288 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 PHBP35232 272 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 UGT1A3P35503 534 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 UGT1A5P35504 534 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 THOP1P52888 689 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 PMS2P54278 862 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 PTPN5P54829 565 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 GPX6P59796 221 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 CDK3Q00526 305 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 KYNUQ16719 465 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 MAP9Q49MG5 647 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 AARS2Q5JTZ9 985 aaKnown RBP13.47□□□□□ -0.25
CPNE1-227ENST00000498056 SPDYCQ5MJ68 293 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 PDPK2PQ6A1A2 396 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 EMBQ6PCB8 327 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 TRMT10BQ6PF06 316 aaKnown RBP13.47□□□□□ -0.25
CPNE1-227ENST00000498056 ADAMTSL4Q6UY14 1074 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 TMEM145Q8NBT3 493 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 UBLCP1Q8WVY7 318 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-227ENST00000498056 PIGKQ92643 395 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 GLYATL1Q969I3 302 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 ULK4Q96C45 1275 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 ZC3H10Q96K80 434 aaKnown RBP13.47□□□□□ -0.25
CPNE1-227ENST00000498056 FAM167BQ9BTA0 163 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 UGT1A7Q9HAW7 530 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 UGT1A10Q9HAW8 530 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 UGT1A8Q9HAW9 530 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 PLAC1Q9HBJ0 212 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 TM9SF3Q9HD45 589 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 PHPT1Q9NRX4 125 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-227ENST00000498056 IARS2Q9NSE4 1012 aaKnown RBP13.47□□□□□ -0.25
CPNE1-227ENST00000498056 FAM86C1Q9NVL1 165 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 MARCH4Q9P2E8 410 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-227ENST00000498056 SLC17A6Q9P2U8 582 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 RAB21Q9UL25 225 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 FAM169AQ9Y6X4 670 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 USP34Q70CQ2 3546 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 MUC6Q6W4X9 2439 aa13.47□□□□□ -0.25
CPNE1-227ENST00000498056 TCRBV9S1A1TA0A576 114 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 CACNB4O00305 520 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 BCAT2O15382 392 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 CD3EAPO15446 510 aaKnown RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 CTIFO43310 598 aaKnown RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 MTX2O75431 263 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 SPAG6O75602 509 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 TUBBP07437 444 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 F7P08709 466 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 THEGLP0DJG4 465 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 ERVK-10P10266 1014 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 MYCLP1P12525 358 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 PSMA3P25788 255 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 SLC1A2P43004 574 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 ARCN1P48444 511 aaKnown RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 CDKN1CP49918 316 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 RACK1P63244 317 aaKnown RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 CBLBQ13191 982 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 PDE1CQ14123 709 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 SEMA3AQ14563 771 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 EFTUD2Q15029 972 aaKnown RBP eCLIP13.46□□□□□ -0.255e-10■■□□□ 11.8
CPNE1-227ENST00000498056 HSP90AA5PQ58FG0 334 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 GPRC6AQ5T6X5 926 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 MRNIPQ6NTE8 343 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 ABI3BPQ7Z7G0 1075 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 LDB1Q86U70 411 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 RELL1Q8IUW5 271 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 OR13H1Q8NG92 308 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 GABPB2Q8TAK5 448 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 UHMK1Q8TAS1 419 aaKnown RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 ZNF398Q8TD17 642 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 AENQ8WTP8 325 aaKnown RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 DNASE2BQ8WZ79 361 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 ATOH1Q92858 354 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-227ENST00000498056 HIC2Q96JB3 615 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 VPS35Q96QK1 796 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms