RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 ALG9Q9H6U8 611 aa17.69■□□□□ 0.42
CHRNA4-206ENST00000498043 PCDH12Q9NPG4 1184 aa17.69■□□□□ 0.42
CHRNA4-206ENST00000498043 GALPQ9UBC7 116 aa17.69■□□□□ 0.42
CHRNA4-206ENST00000498043 CRLS1Q9UJA2 301 aa17.69■□□□□ 0.42
CHRNA4-206ENST00000498043 ANTXRLA6NF34 631 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 NEMP2A6NFY4 417 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 UPK3BL1B0FP48 263 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 UPK3BL2E5RIL1 263 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 ZBTB14O43829 449 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 CTC1Q2NKJ3 1217 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 SETMARQ53H47 684 aaPredicted RBP17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 ZNF805Q5CZA5 627 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 CERS6Q6ZMG9 384 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 YTHDF3Q7Z739 585 aaKnown RBP17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 STK40Q8N2I9 435 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 TXNDC5Q8NBS9 432 aaKnown RBP17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 OR6Y1Q8NGX8 325 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 PPP4R1Q8TF05 950 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 ERLEC1Q96DZ1 483 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 C19orf43Q9BQ61 176 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 GATA5Q9BWX5 397 aaPredicted RBP17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 DNAJC16Q9Y2G8 782 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 TSPAN11A1L157 253 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 KPNA3O00505 521 aaPredicted RBP17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 VPS26AO75436 327 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 XPAP23025 273 aaPredicted RBP17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 LTBRP36941 435 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 SLC26A3P40879 764 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 METAP1P53582 386 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 ARHGEF7Q14155 803 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 ACAP2Q15057 778 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 HNRNPA1L2Q32P51 320 aaKnown RBP17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 PAQR3Q6TCH7 311 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 SERPINA13PQ6UXR4 307 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 CBARPQ8N350 705 aaPredicted RBP17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 SIDT2Q8NBJ9 832 aaKnown RBP17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 PTERQ96BW5 349 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 SLC30A3Q99726 388 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 P2RY12Q9H244 342 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 KCNK13Q9HB14 408 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 CD84Q9UIB8 345 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 SARDHQ9UL12 918 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 PLXNB3Q9ULL4 1909 aa17.68■□□□□ 0.42
CHRNA4-206ENST00000498043 IQCF5A8MTL0 148 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 E5RI56 91 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 H3BMM5 538 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 H2AFYO75367 372 aaKnown RBP17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 ESR1P03372 595 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 CD1DP15813 335 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 TIMP2P16035 220 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 ACRV1P26436 265 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 VIPR1P32241 457 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 PARS2Q7L3T8 475 aaKnown RBP17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 TTC7BQ86TV6 843 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 MICALL1Q8N3F8 863 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 FITM2Q8N6M3 262 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 ZNF398Q8TD17 642 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 EXT2Q93063 718 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 LRIG1Q96JA1 1093 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 CYP4F12Q9HCS2 524 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 SARS2Q9NP81 518 aaKnown RBP17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 RRP15Q9Y3B9 282 aaKnown RBP17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 MTCH2Q9Y6C9 303 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 OAS3Q9Y6K5 1087 aaKnown RBP17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 TICRRQ7Z2Z1 1910 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 TRBV5-4A0A0C4DH59 114 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 EDDM13A0A1B0GTR0 161 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 C16orf96A6NNT2 1141 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 PRMT5O14744 637 aaPredicted RBP17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 KAT7O95251 611 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 HSPA4LO95757 839 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 PYGLP06737 847 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 RBP1P09455 135 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 CYP2A6P11509 494 aaPredicted RBP17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 CHRM3P20309 590 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 KCNA5P22460 613 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 MTHFRP42898 656 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 CCR10P46092 362 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 SPINT3P49223 89 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 ARFIP2P53365 341 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 NAGLUP54802 743 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 ADARP55265 1226 aaKnown RBP17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 PFKPQ01813 784 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 C9orf64Q5T6V5 341 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 GIMAP7Q8NHV1 300 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 KCNJ9Q92806 393 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 TRMT61BQ9BVS5 477 aaKnown RBP17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 CLPBQ9H078 707 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 ABCG8Q9H221 673 aa17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 TRMT6Q9UJA5 497 aaKnown RBP17.67■□□□□ 0.42
CHRNA4-206ENST00000498043 TMEM114B3SHH9 223 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 UBOX5O94941 541 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 ATP5F1P24539 256 aaPredicted RBP17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 SOX9P48436 509 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 HSD11B1LQ7Z5J1 315 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 ISCA2Q86U28 154 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 RBFAQ8N0V3 343 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 NXPE1Q8N323 547 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 PIWIL2Q8TC59 973 aaKnown RBP17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 AGR3Q8TD06 166 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms