RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 GDAP2Q9NXN4 497 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 DDX43Q9NXZ2 648 aaKnown RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 DPP3Q9NY33 737 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 RBAKQ9NYW8 714 aaPredicted RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 VSX1Q9NZR4 365 aaPredicted RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 HESX1Q9UBX0 185 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 AGO2Q9UKV8 859 aaKnown RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 ITGA11Q9UKX5 1188 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 BTBD3Q9Y2F9 522 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 CELSR2Q9HCU4 2923 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 ADAMTS9Q9P2N4 1935 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 A0A087X0M5 115 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 TRAV19A0A0A6YYK7 116 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 A0A1B0GX30 115 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 A0A1W2PPH5 198 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 MYMKA6NI61 221 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 F5H0A9 414 aaPredicted RBP4.42□□□□□ -1.7
VPS52-222ENST00000495981 K7EQS6 105 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 CCP110O43303 1012 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 ATP2C2O75185 946 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 CYP7B1O75881 506 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 AGFG2O95081 481 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 PRSS23O95084 383 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 WNT11O96014 354 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 ANXA6P08133 673 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 GLI1P08151 1106 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 CSH1P0DML2 217 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 CSH2P0DML3 217 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 PFKLP17858 780 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 CR2P20023 1033 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 CYP2F1P24903 491 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 GJB2P29033 226 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 ABCD1P33897 745 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 RDXP35241 583 aaKnown RBP4.42□□□□□ -1.7
VPS52-222ENST00000495981 HOXD13P35453 343 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 LONP1P36776 959 aaKnown RBP4.42□□□□□ -1.7
VPS52-222ENST00000495981 P2RY2P41231 377 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 PNPLA4P41247 253 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 MAGEA11P43364 429 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 PTDSS1P48651 473 aaKnown RBP4.42□□□□□ -1.7
VPS52-222ENST00000495981 POLE2P56282 527 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 TSPY1Q01534 308 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 BNC1Q01954 994 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 FHL3Q13643 280 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 SOWAHAQ2M3V2 549 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 FAM214AQ32MH5 1076 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 PLA1AQ53H76 456 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 ARTNQ5T4W7 220 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 MANEALQ5VSG8 457 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 ADALQ6DHV7 355 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 MRNIPQ6NTE8 343 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 ARMCX5Q6P1M9 558 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 FAM171BQ6P995 826 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 C4orf50Q6ZRC1 276 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 CBLL1Q75N03 491 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 RRAGAQ7L523 313 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 ANKS1BQ7Z6G8 1248 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 OR8H2Q8N162 312 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 TMEM86AQ8N2M4 240 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 ARL14EPQ8N8R7 260 aaPredicted RBP4.42□□□□□ -1.7
VPS52-222ENST00000495981 EXD3Q8N9H8 876 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 PDPRQ8NCN5 879 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 TSTD1Q8NFU3 115 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 NLGN4YQ8NFZ3 816 aaPredicted RBP4.42□□□□□ -1.7
VPS52-222ENST00000495981 OR5B17Q8NGF7 314 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 OR14K1Q8NGZ2 314 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 RFFLQ8WZ73 363 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 MRPS31Q92665 395 aaKnown RBP4.42□□□□□ -1.7
VPS52-222ENST00000495981 RSC1A1Q92681 617 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 CD101Q93033 1021 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 P2RY11Q96G91 374 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 PCED1BQ96HM7 432 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 EPSTI1Q96J88 318 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 SPATA17Q96L03 361 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 RPL10LQ96L21 214 aaKnown RBP4.42□□□□□ -1.7
VPS52-222ENST00000495981 RBM15Q96T37 977 aaKnown RBP eCLIP4.42□□□□□ -1.7
VPS52-222ENST00000495981 ACBD6Q9BR61 282 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 FAM213AQ9BRX8 229 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 EPS8L2Q9H6S3 715 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 ZDHHC4Q9NPG8 344 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 G6PC2Q9NQR9 355 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 DUS2Q9NX74 493 aaKnown RBP4.42□□□□□ -1.7
VPS52-222ENST00000495981 ETAA1Q9NY74 926 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 UXTQ9UBK9 157 aaPredicted RBP4.42□□□□□ -1.7
VPS52-222ENST00000495981 SEL1LQ9UBV2 794 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 AASSQ9UDR5 926 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 MMP17Q9ULZ9 603 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 PTPRBP23467 1997 aa4.42□□□□□ -1.7
VPS52-222ENST00000495981 PCNX1Q96RV3 2341 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 CELSR1Q9NYQ6 3014 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 MYOFQ9NZM1 2061 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 CLEC18AA5D8T8 446 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 CDHR4A6H8M9 788 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 ZNF840PA6NDX5 716 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 ZNF503-AS2A6NEH8 195 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 SGK1O00141 431 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 MYO1CO00159 1063 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 LEFTY2O00292 366 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms