RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ASIC4Q96FT7 647 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 MCCC1Q96RQ3 725 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-225ENST00000494465 TFB2MQ9H5Q4 396 aaKnown RBP16.43■□□□□ 0.22
ATG4B-225ENST00000494465 SYTL2Q9HCH5 934 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 SORCS3Q9UPU3 1222 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-225ENST00000494465 WASH3PC4AMC7 463 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 CEP290O15078 2479 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 PFDN6O15212 129 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 CISD3P0C7P0 127 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 VIPR2P41587 438 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 EML3Q32P44 896 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 RPS27LQ71UM5 84 aaKnown RBP16.43■□□□□ 0.22
ATG4B-225ENST00000494465 PLPP6Q8IY26 295 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 PAF1Q8N7H5 531 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 CD200R1Q8TD46 325 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 CYB5D2Q8WUJ1 264 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 L3HYPDHQ96EM0 354 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 ZNF641Q96N77 438 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-225ENST00000494465 OR52B2Q96RD2 323 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 GSTO2Q9H4Y5 243 aa16.43■□□□□ 0.22
ATG4B-225ENST00000494465 DUS2Q9NX74 493 aaKnown RBP16.43■□□□□ 0.22
ATG4B-225ENST00000494465 TRBV5-4A0A0C4DH59 114 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 F8W8V4 182 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 ESR1P03372 595 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 JUNP05412 331 aaKnown RBP16.42■□□□□ 0.22
ATG4B-225ENST00000494465 UGT2B4P06133 528 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 HNRNPLP14866 589 aaKnown RBP eCLIP16.42■□□□□ 0.22
ATG4B-225ENST00000494465 AOC1P19801 751 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 IMPDH1P20839 514 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 LHCGRP22888 699 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 NFATC2Q13469 925 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 CFAP157Q5JU67 520 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 SEL1L3Q68CR1 1132 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 CERS6Q6ZMG9 384 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 TPRG1Q6ZUI0 275 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 NPAS3Q8IXF0 933 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 STK40Q8N2I9 435 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 SIDT2Q8NBJ9 832 aaKnown RBP16.42■□□□□ 0.22
ATG4B-225ENST00000494465 OSCP1Q8WVF1 389 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 KCNJ9Q92806 393 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 KIAA1191Q96A73 305 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 TNFRSF12AQ9NP84 129 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 COMMD10Q9Y6G5 202 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 VPS26AO75436 327 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 SNUPNO95149 360 aaKnown RBP16.42■□□□□ 0.22
ATG4B-225ENST00000494465 PYGLP06737 847 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 ESRRAP11474 423 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-225ENST00000494465 POLR2EP19388 210 aaKnown RBP16.42■□□□□ 0.22
ATG4B-225ENST00000494465 TTC31Q49AM3 519 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-225ENST00000494465 FAM78AQ5JUQ0 283 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 ZNF678Q5SXM1 525 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 RINLQ6ZS11 566 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 FRMD7Q6ZUT3 714 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 SNX20Q7Z614 316 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 SERPINA9Q86WD7 417 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 C12orf40Q86WS4 652 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 CBARPQ8N350 705 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-225ENST00000494465 KIAA1958Q8N8K9 716 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 OSBPL1AQ9BXW6 950 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 PBX4Q9BYU1 374 aa16.42■□□□□ 0.22
ATG4B-225ENST00000494465 PIKFYVEQ9Y2I7 2098 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 EPOPA6NHQ4 379 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 IQCF5A8MTL0 148 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 TMEM233B4DJY2 109 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 UBXN8O00124 270 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 HOXC11O43248 304 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-225ENST00000494465 ENO1P06733 434 aaKnown RBP16.41■□□□□ 0.22
ATG4B-225ENST00000494465 ADH5P11766 374 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 CLCN7P51798 805 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 RAD51Q06609 339 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 TBCCQ15814 346 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 LRRC66Q68CR7 880 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 GPR26Q8NDV2 337 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 GDPD5Q8WTR4 605 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 STON2Q8WXE9 905 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 BOCQ9BWV1 1114 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 WDR55Q9H6Y2 383 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-225ENST00000494465 ASB8Q9H765 288 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 SFXN1Q9H9B4 322 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 TAS2R1Q9NYW7 299 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 VTI1BQ9UEU0 232 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 APPL1Q9UKG1 709 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 STK38LQ9Y2H1 464 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 GLYATL1P3A0A0U1RQE8 302 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 TTC34A8MYJ7 566 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 SLCO1B7G3V0H7 640 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 PRMT5O14744 637 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-225ENST00000494465 KERAO60938 352 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 CHRM1P11229 460 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-225ENST00000494465 UGT1A6P19224 532 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 UGT1A1P22309 533 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 UGT1A4P22310 534 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 UGT1A3P35503 534 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 UGT1A5P35504 534 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 HERVK_113P63132 956 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 PTSQ03393 145 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 GALNT1Q10472 559 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-225ENST00000494465 CHRNA6Q15825 494 aa16.41■□□□□ 0.22
ATG4B-225ENST00000494465 UNC50Q53HI1 259 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms