RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 HSPA4LO95757 839 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 SNRNP70P08621 437 aaKnown RBP2.39□□□□□ -2.03
LMNB1-207ENST00000494185 QDPRP09417 244 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 CLTBP09497 229 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 SRCP12931 536 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 ITGAXP20702 1163 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 MCM3P25205 808 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 MT3P25713 68 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 EEF1DP29692 281 aaKnown RBP2.39□□□□□ -2.03
LMNB1-207ENST00000494185 HOXA13P31271 388 aaPredicted RBP2.39□□□□□ -2.03
LMNB1-207ENST00000494185 SHMT1P34896 483 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 PIGAP37287 484 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 PBX3P40426 434 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 RAD23AP54725 363 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 SEC61BP60468 96 aaKnown RBP2.39□□□□□ -2.03
LMNB1-207ENST00000494185 SORDQ00796 357 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 FOXM1Q08050 763 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 NIPAL4Q0D2K0 466 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 CSTF3Q12996 717 aaKnown RBP2.39□□□□□ -2.03
LMNB1-207ENST00000494185 FGFBP1Q14512 234 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 KRT81Q14533 505 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 DRAP1Q14919 205 aaPredicted RBP2.39□□□□□ -2.03
LMNB1-207ENST00000494185 MED22Q15528 200 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 NTRK2Q16620 822 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 KYNUQ16719 465 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 SYT16Q17RD7 645 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 TMEM266Q2M3C6 531 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 USP41Q3LFD5 358 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 ASPRV1Q53RT3 343 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 SLC10A5Q5PT55 438 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 GARNL3Q5VVW2 1013 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 WBP2NLQ6ICG8 309 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 TRNP1Q6NT89 227 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 TTI2Q6NXR4 508 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 KLHL35Q6PF15 583 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 TSSK4Q6SA08 328 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 CHST9Q7L1S5 443 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 TICAM1Q8IUC6 712 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 GALNT13Q8IUC8 556 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 SLC35F3Q8IY50 421 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 CLIP4Q8N3C7 705 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 C17orf53Q8N3J3 647 aaPredicted RBP2.39□□□□□ -2.03
LMNB1-207ENST00000494185 TTC30BQ8N4P2 665 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 ZBTB2Q8N680 514 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 POMGNT2Q8NAT1 580 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 HUS1BQ8NHY5 278 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 ADAMTS14Q8WXS8 1223 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 PABPC5Q96DU9 382 aaKnown RBP2.39□□□□□ -2.03
LMNB1-207ENST00000494185 CMTM3Q96MX0 182 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 CTAGE1Q96RT6 745 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 TMEM47Q9BQJ4 181 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 MRPL1Q9BYD6 325 aaKnown RBP2.39□□□□□ -2.03
LMNB1-207ENST00000494185 GLIS2Q9BZE0 524 aaPredicted RBP2.39□□□□□ -2.03
LMNB1-207ENST00000494185 NDST4Q9H3R1 872 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 ZWILCHQ9H900 591 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 SCPEP1Q9HB40 452 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 PDE7BQ9NP56 450 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 CCDC177Q9NQR7 707 aaPredicted RBP2.39□□□□□ -2.03
LMNB1-207ENST00000494185 SLC6A13Q9NSD5 602 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 MCM9Q9NXL9 1143 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 ZNF224Q9NZL3 707 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 DLGAP2Q9P1A6 1054 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 SIX4Q9UIU6 781 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 INTS6Q9UL03 887 aaKnown RBP2.39□□□□□ -2.03
LMNB1-207ENST00000494185 MKLN1Q9UL63 735 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 MTMR6Q9Y217 621 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 ADAM18Q9Y3Q7 739 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 SNX9Q9Y5X1 595 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 SESN1Q9Y6P5 492 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 CAPN7Q9Y6W3 813 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 FAM169AQ9Y6X4 670 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 RPGRIP1LQ68CZ1 1315 aa2.39□□□□□ -2.03
LMNB1-207ENST00000494185 ZNF644Q9H582 1327 aaPredicted RBP2.39□□□□□ -2.03
LMNB1-207ENST00000494185 FAM237BA0A1B0GVD1 139 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 TSPY2A6NKD2 308 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 KRTAP29-1A8MX34 341 aaPredicted RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 A8MXE2 369 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 PRR23D1E9PI22 279 aaPredicted RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 J3KR12 359 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 HSPA12AO43301 675 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 ADAM20O43506 726 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 BUB3O43684 328 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 ZIC3O60481 467 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 HNRNPCL1O60812 293 aaKnown RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 ENTPD3O75355 529 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 SLC25A12O75746 678 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 BAG2O95816 211 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 HSP90AB1P08238 724 aaKnown RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 TSPY3P0CV98 308 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 TSPY8P0CW00 308 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 PRR23D2P0DMB1 279 aaPredicted RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 ACTN1P12814 892 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 RARGP13631 454 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 ZNF182P17025 639 aaPredicted RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 TMEM11P17152 192 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 SAT1P21673 171 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 GCH1P30793 250 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 HOXC9P31274 260 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 HNRNPH1P31943 449 aaKnown RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 MSH2P43246 934 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms