RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 PEX6Q13608 980 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 NFATC4Q14934 902 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 ATP13A5Q4VNC0 1218 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 CEP128Q6ZU80 1094 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 SNX20Q7Z614 316 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 PHYKPLQ8IUZ5 450 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 ANKMY2Q8IV38 441 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 GPR161Q8N6U8 529 aaKnown RBP14.46□□□□□ -0.09
BRCA1-223ENST00000494123 FBXO36Q8NEA4 188 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 FUBP1Q96AE4 644 aaKnown RBP14.46□□□□□ -0.09
BRCA1-223ENST00000494123 CFAP36Q96G28 342 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 FMO2Q99518 471 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 TRIM56Q9BRZ2 755 aaKnown RBP14.46□□□□□ -0.09
BRCA1-223ENST00000494123 NUSAP1Q9BXS6 441 aaKnown RBP14.46□□□□□ -0.09
BRCA1-223ENST00000494123 TEX101Q9BY14 249 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 PHACTR1Q9C0D0 580 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 ZC3H7BQ9UGR2 993 aaKnown RBP14.46□□□□□ -0.09
BRCA1-223ENST00000494123 CRLS1Q9UJA2 301 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 SLC6A14Q9UN76 642 aa14.46□□□□□ -0.09
BRCA1-223ENST00000494123 RALGAPA1Q6GYQ0 2036 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 CCDC162PA2VCL2 907 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 PATE3B3GLJ2 98 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 PROB1E7EW31 1015 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 GAPDHSO14556 408 aaPredicted RBP14.45□□□□□ -0.1
BRCA1-223ENST00000494123 KHNYNO15037 678 aaKnown RBP14.45□□□□□ -0.1
BRCA1-223ENST00000494123 UGT1A9O60656 530 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 SLC25A14O95258 325 aaPredicted RBP14.45□□□□□ -0.1
BRCA1-223ENST00000494123 TTC4O95801 387 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 GOT2P00505 430 aaKnown RBP14.45□□□□□ -0.1
BRCA1-223ENST00000494123 UGT1A6P19224 532 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 UGT1A1P22309 533 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 UGT1A4P22310 534 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 PSMA3P25788 255 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 UGT1A3P35503 534 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 UGT1A5P35504 534 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 KIAA1024LP59773 190 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 CACNG1Q06432 222 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 NFATC2Q13469 925 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 ANKRD20A4Q4UJ75 823 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 KIAA0930Q6ICG6 404 aaPredicted RBP14.45□□□□□ -0.1
BRCA1-223ENST00000494123 SLC23A3Q6PIS1 610 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 TAS2R42Q7RTR8 314 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 TMEM135Q86UB9 458 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 OTUD6BQ8N6M0 293 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.45□□□□□ -0.1
BRCA1-223ENST00000494123 OR4L1Q8NH43 312 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 PYROXD1Q8WU10 500 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 GLYATL1Q969I3 302 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.45□□□□□ -0.1
BRCA1-223ENST00000494123 ULK4Q96C45 1275 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 VPS35Q96QK1 796 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 TSPYL1Q9H0U9 437 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 SMOC1Q9H4F8 434 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 FAM96AQ9H5X1 160 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 UGT1A7Q9HAW7 530 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 UGT1A10Q9HAW8 530 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 UGT1A8Q9HAW9 530 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 NFU1Q9UMS0 254 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 ANKRD6Q9Y2G4 727 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 TEX264Q9Y6I9 313 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 TP53BP1Q12888 1972 aaPredicted RBP14.45□□□□□ -0.1
BRCA1-223ENST00000494123 PI4KAP42356 2102 aa14.45□□□□□ -0.1
BRCA1-223ENST00000494123 OR51F1A6NGY5 319 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 GPR39O43194 453 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 VAPBO95292 243 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 ASMTLO95671 621 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 HOXC4P09017 264 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-223ENST00000494123 NXPH1P58417 271 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 CRYMQ14894 314 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 GPR33Q49SQ1 333 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 FASTKD1Q53R41 847 aaKnown RBP14.44□□□□□ -0.1
BRCA1-223ENST00000494123 SPANXN3Q5MJ09 141 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 DOK6Q6PKX4 331 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 ENPP7Q6UWV6 458 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 MACC1Q6ZN28 852 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 TRIM74Q86UV6 250 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 IGDCC3Q8IVU1 814 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 SLC22A18ASQ8N1D0 253 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 BTN2A2Q8WVV5 523 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 WDR92Q96MX6 357 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 LGR4Q9BXB1 951 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 SMOXQ9NWM0 555 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.44□□□□□ -0.1
BRCA1-223ENST00000494123 MOSPD1Q9UJG1 213 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 V9GYY5 206 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-223ENST00000494123 SPTY2D1-AS1A0A0U1RR47 76 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 SYPP08247 313 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 SPEM2Q0P670 501 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 GRIK2Q13002 908 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 THOC5Q13769 683 aaKnown RBP14.44□□□□□ -0.1
BRCA1-223ENST00000494123 FASTKD3Q14CZ7 662 aaKnown RBP14.44□□□□□ -0.1
BRCA1-223ENST00000494123 SMAD1Q15797 465 aaKnown RBP14.44□□□□□ -0.1
BRCA1-223ENST00000494123 LONRF1Q17RB8 773 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 KIF19Q2TAC6 998 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 PLA2G2CQ5R387 149 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 PALM2Q8IXS6 379 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 OR56A4Q8NGH8 313 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 RUBCNQ92622 972 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 TTC25Q96NG3 672 aa14.44□□□□□ -0.1
BRCA1-223ENST00000494123 FCRL3Q96P31 734 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms