RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 AHSGP02765 367 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 UGT1A6P19224 532 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 AOC1P19801 751 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 UGT1A1P22309 533 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 UGT1A4P22310 534 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 ACRV1P26436 265 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 GABRB3P28472 473 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 PMLP29590 882 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 OXTRP30559 389 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 ACSL1P33121 698 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 SPRP35270 261 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-231ENST00000494043 UGT1A3P35503 534 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 UGT1A5P35504 534 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 ABCG1P45844 678 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 TTPAP49638 278 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 CCR3P51677 355 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 PPP2CBP62714 309 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 PPP2CAP67775 309 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 DPTQ07507 201 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 ILF2Q12905 390 aaKnown RBP11.33□□□□□ -0.6
MCF2L-231ENST00000494043 GPS2Q13227 327 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 BMPR2Q13873 1038 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 AGERQ15109 404 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 DBN1Q16643 649 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 MAP7D1Q3KQU3 841 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 ATP13A5Q4VNC0 1218 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 ZNF789Q5FWF6 425 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 TMEM31Q5JXX7 168 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 LYPLAL1Q5VWZ2 237 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 CERS6Q6ZMG9 384 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 MAMSTRQ6ZN01 415 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 NLRP8Q86W28 1048 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 ZC3HC1Q86WB0 502 aaKnown RBP11.33□□□□□ -0.6
MCF2L-231ENST00000494043 SERPINA9Q86WD7 417 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 HORMAD1Q86X24 394 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 CYP4X1Q8N118 509 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 CNPY4Q8N129 248 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 NXPE1Q8N323 547 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 CAMKK1Q8N5S9 505 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 PNPLA1Q8N8W4 532 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 OR2T34Q8NGX1 318 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 LPGAT1Q92604 370 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 VPS39Q96JC1 886 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 C1QTNF2Q9BXJ5 285 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 CRLS1Q9UJA2 301 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 VPS9D1Q9Y2B5 631 aa11.33□□□□□ -0.6
MCF2L-231ENST00000494043 TBC1D3DA0A087WVF3 549 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TBC1D3IA0A087WXS9 549 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TBC1D3EA0A087X179 549 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TBC1D3KA0A087X1G2 549 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 HMX2A2RU54 273 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TBC1D3FA6NER0 549 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-231ENST00000494043 FAM47DPA6NHR8 397 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 FADS2P1A8MWK0 482 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 C10orf142B7Z368 130 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TBC1D3LB9A6J9 549 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TRIM49D1C9J1S8 452 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 K7ESF4 209 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 PFDN6O15212 129 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 NDUFS3O75489 264 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 HAUS5O94927 633 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 SEMA4FO95754 770 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 SYF2O95926 243 aaKnown RBP11.32□□□□□ -0.6
MCF2L-231ENST00000494043 SOD1P00441 154 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 ITGA2BP08514 1039 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 SNRPAP09012 282 aaKnown RBP11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TBC1D3HP0C7X1 549 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 CA5AP35218 305 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 PPARGP37231 505 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-231ENST00000494043 CXCL12P48061 93 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 CLCN5P51795 746 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 FGL2Q14314 439 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 SETMARQ53H47 684 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TTMPQ5BVD1 217 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TNFAIP8L3Q5GJ75 292 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 LGSNQ5TDP6 509 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 AGBL2Q5U5Z8 902 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TBC1D3GQ6DHY5 549 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TBC1D3CQ6IPX1 549 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 CNSTQ6PJW8 725 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TRIM69Q86WT6 500 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TBC1D3Q8IZP1 549 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-231ENST00000494043 MZB1Q8WU39 189 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 ARL8AQ96BM9 186 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 MTBPQ96DY7 904 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 ATXN7L3BQ96GX2 97 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 VPS35Q96QK1 796 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TTC1Q99614 292 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 GPR22Q99680 433 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TPSD1Q9BZJ3 242 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 STMN4Q9H169 189 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-231ENST00000494043 MED4Q9NPJ6 270 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TMPRSS11EQ9UL52 423 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 CORO1CQ9ULV4 474 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-231ENST00000494043 CYP8B1Q9UNU6 501 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 TECTAO75443 2155 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 A0A0C4DFX4 3053 aa11.32□□□□□ -0.6
MCF2L-231ENST00000494043 NCOR1O75376 2440 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 LRRK1Q38SD2 2015 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 IGHV1OR15-9A0A0B4J2B8 117 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms