RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 K7ERQ8 282 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 UBXN8O00124 270 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 PRMT5O14744 637 aaPredicted RBP10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 SMAD6O43541 496 aaKnown RBP10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 KRT34O76011 436 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 GFAPP14136 432 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 IL2P60568 153 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 UBE3AQ05086 875 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 CDC16Q13042 620 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 PITRM1Q5JRX3 1037 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 SNX32Q86XE0 403 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 MYLK4Q86YV6 388 aaPredicted RBP10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 CAMK1DQ8IU85 385 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 FBXO39Q8N4B4 442 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 KYQ8NBH2 561 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 CD200R1Q8TD46 325 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 SERPINI1Q99574 410 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 ZNF106Q9H2Y7 1883 aaKnown RBP10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 H0Y3Z8 333 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 UBFD1O14562 309 aaKnown RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 GRM6O15303 877 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 CCL16O15467 120 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 KRT36O76013 467 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 ZNF7P17097 686 aaPredicted RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 CD70P32970 193 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 BMPR1AP36894 532 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 CDKN1CP49918 316 aaPredicted RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 FPGSQ05932 587 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 TBL3Q12788 808 aaKnown RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 PSRC1Q6PGN9 363 aaPredicted RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 TPGS1Q6ZTW0 290 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 TAS2R42Q7RTR8 314 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 SNX20Q7Z614 316 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 DEFB107AQ8IZN7 70 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 CMTM8Q8IZV2 173 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 FBXW8Q8N3Y1 598 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 SHKBP1Q8TBC3 707 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 PHOSPHO2Q8TCD6 241 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 PPP1R36Q96LQ0 422 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 BPIFA1Q9NP55 256 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 INTS6Q9UL03 887 aaKnown RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 MTF2Q9Y483 593 aaPredicted RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 MTCL1Q9Y4B5 1905 aaKnown RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 TRBV5-4A0A0C4DH59 114 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 SUPT3HB4E1H0 165 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 E5RI56 91 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 SUPT3HO75486 399 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 ZNF821O75541 412 aaPredicted RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 SKAP2O75563 359 aaPredicted RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 TSPAN12O95859 305 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 RPS17P08708 135 aaKnown RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 TCF3P15923 654 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 PTPN2P17706 415 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 ITGALP20701 1170 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 PTDSS1P48651 473 aaKnown RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 MTTPP55157 894 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 LCP2Q13094 533 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 DMC1Q14565 340 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 CDKN3Q16667 212 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 PFKFB4Q16877 469 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 GPR33Q49SQ1 333 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 ACCSLQ4AC99 568 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 ANKS6Q68DC2 871 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 EFL1Q7Z2Z2 1120 aaKnown RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 PCDH20Q8N6Y1 951 aaKnown RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 BHMTQ93088 406 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 FUBP1Q96AE4 644 aaKnown RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 CLPTM1LQ96KA5 538 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 CPEB1Q9BZB8 566 aaKnown RBP10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 EFCAB1Q9HAE3 211 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 DHRS7Q9Y394 339 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 PPIL1Q9Y3C6 166 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 LRRC42Q9Y546 428 aa10.72□□□□□ -0.69
PHACTR4-204ENST00000493669 UBDO15205 165 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 NIPSNAP2O75323 286 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 ECI2O75521 394 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 SRCP12931 536 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 CTPS1P17812 591 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 VHLP40337 213 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 ERVFC1P60507 584 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 C1QTNF8P60827 252 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 AP2B1P63010 937 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 KANK2Q63ZY3 851 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 TMEM198Q66K66 360 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 GRAMD4Q6IC98 578 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 ADGRG6Q86SQ4 1221 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 RBFAQ8N0V3 343 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 PGAM4Q8N0Y7 254 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 SLC22A17Q8WUG5 538 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 EXT2Q93063 718 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 EID2BQ96D98 161 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 RSRC1Q96IZ7 334 aaKnown RBP10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 TNFRSF12AQ9NP84 129 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 UTP6Q9NYH9 597 aaKnown RBP10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 PLK2Q9NYY3 685 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 TBC1D14Q9P2M4 693 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 PRKAG2Q9UGJ0 569 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 MCM8Q9UJA3 840 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 GNPTGQ9UJJ9 305 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 SLC25A13Q9UJS0 675 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms