RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 CIAPIN1Q6FI81 312 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 CCDC149Q6ZUS6 474 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 ANKS3Q6ZW76 656 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 P2RY8Q86VZ1 359 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 SLC44A2Q8IWA5 706 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-205ENST00000493587 TNS4Q8IZW8 715 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 GPR156Q8NFN8 814 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 OR13J1Q8NGT2 312 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 CA5BP1Q8WTZ4 195 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 SLC20A1Q8WUM9 679 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 NKD2Q969F2 451 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-205ENST00000493587 NARS2Q96I59 477 aaKnown RBP6.83□□□□□ -1.32
VPS13B-205ENST00000493587 PNMA5Q96PV4 448 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 NPAS2Q99743 824 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 AGPAT1Q99943 283 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 BCL7BQ9BQE9 202 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 CINPQ9BW66 212 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-205ENST00000493587 C20orf27Q9GZN8 174 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 PPIL3Q9H2H8 161 aaKnown RBP6.83□□□□□ -1.32
VPS13B-205ENST00000493587 TNKS2Q9H2K2 1166 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 RSAD1Q9HA92 442 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 KLHL11Q9NVR0 708 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 MTMR4Q9NYA4 1195 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 NPAP1Q9NZP6 1156 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 DERAQ9Y315 318 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 V9GYQ6 96 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 HEATR9A2RTY3 570 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 MEIOCA2RUB1 952 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 DENND3A2RUS2 1198 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 H7C2Y5 167 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 FAM155BO75949 473 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 GNRH1P01148 92 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 AMHP03971 560 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 DHRS4L1P0CG22 281 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 CYP2C8P10632 490 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 MYL4P12829 197 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 IL7RP16871 459 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 CD58P19256 250 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 NUP62P37198 522 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-205ENST00000493587 SLC15A1P46059 708 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 FXR2P51116 673 aaKnown RBP eCLIP6.83□□□□□ -1.32
VPS13B-205ENST00000493587 MAP2K6P52564 334 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 NDST1P52848 882 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 HERVK_113P63132 956 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 FLI1Q01543 452 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-205ENST00000493587 EPS8Q12929 822 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 GRM1Q13255 1194 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 PRPSAP1Q14558 356 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 AOC3Q16853 763 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 PIGGQ5H8A4 983 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 KRT39Q6A163 491 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 CYB5R2Q6BCY4 276 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 NRARPQ7Z6K4 114 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 RNF135Q8IUD6 432 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 COLGALT2Q8IYK4 626 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 PGAM4Q8N0Y7 254 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 CLEC4FQ8N1N0 589 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 UBE2J2Q8N2K1 259 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 OR10T2Q8NGX3 314 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 ZFAND1Q8TCF1 268 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 ASZ1Q8WWH4 475 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 HAS1Q92839 578 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 MAGEB10Q96LZ2 347 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-205ENST00000493587 FAM129BQ96TA1 746 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 GAS2L1Q99501 681 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-205ENST00000493587 C1QTNF1Q9BXJ1 281 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 RAB34Q9BZG1 259 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 NGRNQ9NPE2 291 aaKnown RBP6.83□□□□□ -1.32
VPS13B-205ENST00000493587 ACTR10Q9NZ32 417 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 OAZ3Q9UMX2 235 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 MGAT4BQ9UQ53 548 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 BCS1LQ9Y276 419 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 PLLPQ9Y342 182 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 DDTLA6NHG4 134 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 LOC110117498-PIK3R3F6TDL0 507 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 hCG_1984214I3L0E3 225 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 WDR47O94967 919 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 APOL3O95236 402 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 LCKP06239 509 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 AZGP1P25311 298 aaKnown RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 CTNNB1P35222 781 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 PIK3CBP42338 1070 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 CRKP46108 304 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 KCNC1P48547 511 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 RELQ04864 619 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 MORF4L2Q15014 288 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 IQCCQ4KMZ1 466 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 HSD17B12Q53GQ0 312 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 SETMARQ53H47 684 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 ARMCX4Q5H9R4 360 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 TPRG1LQ5T0D9 272 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 TTC39BQ5VTQ0 682 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 PPP1R18Q6NYC8 613 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 CRTC1Q6UUV9 634 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 R3HCC1LQ7Z5L2 792 aaKnown RBP6.82□□□□□ -1.32
VPS13B-205ENST00000493587 CLEC10AQ8IUN9 316 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 ADGRF2Q8IZF7 708 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 LARGE2Q8N3Y3 721 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 PNMA1Q8ND90 353 aa6.82□□□□□ -1.32
VPS13B-205ENST00000493587 CANT1Q8WVQ1 401 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms