RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SCMH1Q96GD3 660 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 EGLN2Q96KS0 407 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 C3orf30Q96M34 536 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 FIZ1Q96SL8 496 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 SRSF8Q9BRL6 282 aaKnown RBP3.91□□□□□ -1.78
CD46-216ENST00000490278 WACQ9BTA9 647 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 SIL1Q9H173 461 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 PCDH9Q9HC56 1237 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 MCM9Q9NXL9 1143 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 STK39Q9UEW8 545 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 CMAHPQ9Y471 501 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 LOXL2Q9Y4K0 774 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 ARHGEF40Q8TER5 1519 aa3.9□□□□□ -1.78
CD46-216ENST00000490278 EVPLQ92817 2033 aa3.9□□□□□ -1.78
CD46-216ENST00000490278 B4DLN1 442 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 MAP2K7O14733 419 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 CLDN14O95500 239 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 T-ENOLP0DO92 83 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 ACSL1P33121 698 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 MRPL12P52815 198 aaKnown RBP3.9□□□□□ -1.79
CD46-216ENST00000490278 MFAP4P55083 255 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 NANOS2P60321 138 aaKnown RBP3.9□□□□□ -1.79
CD46-216ENST00000490278 SREBF2Q12772 1141 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 CDC16Q13042 620 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 FHL1Q13642 323 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 DECR1Q16698 335 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 KCNT1Q5JUK3 1230 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 RARS2Q5T160 578 aaKnown RBP3.9□□□□□ -1.79
CD46-216ENST00000490278 ZNF280DQ6N043 979 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 CCNI2Q6ZMN8 369 aaPredicted RBP3.9□□□□□ -1.79
CD46-216ENST00000490278 CREB3L2Q70SY1 520 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 GLCCI1Q86VQ1 547 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 OR2AK2Q8NG84 335 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 HM13Q8TCT9 377 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 TANKQ92844 425 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 TAAR8Q969N4 342 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 THOC3Q96J01 351 aaKnown RBP3.9□□□□□ -1.79
CD46-216ENST00000490278 FEM1CQ96JP0 617 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 NUDCD1Q96RS6 583 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 GAD1Q99259 594 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 TM6SF1Q9BZW5 370 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 IL25Q9H293 177 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 EPB41L5Q9HCM4 733 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 SMARCAL1Q9NZC9 954 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 C1RLQ9NZP8 487 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 PCDHGB4Q9UN71 923 aa3.9□□□□□ -1.79
CD46-216ENST00000490278 EIF4E1BA6NMX2 242 aaKnown RBP3.89□□□□□ -1.79
CD46-216ENST00000490278 PROB1E7EW31 1015 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 HS3ST1O14792 307 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 SMAD9O15198 467 aaKnown RBP3.89□□□□□ -1.79
CD46-216ENST00000490278 DDNO94850 711 aaPredicted RBP3.89□□□□□ -1.79
CD46-216ENST00000490278 KDM4BO94953 1096 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 APOBEC1P41238 236 aaKnown RBP3.89□□□□□ -1.79
CD46-216ENST00000490278 SLC15A1P46059 708 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 GPR143P51810 404 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 DSCR9P59020 149 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 TAS2R38P59533 333 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 MRPS5P82675 430 aaKnown RBP3.89□□□□□ -1.79
CD46-216ENST00000490278 ZNF155Q12901 538 aaPredicted RBP3.89□□□□□ -1.79
CD46-216ENST00000490278 STK4Q13043 487 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 TNFAIP1Q13829 316 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 TMEM198Q66K66 360 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 NRROSQ86YC3 692 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 EPHX4Q8IUS5 362 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 ADHFE1Q8IWW8 467 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 JAKMIP2Q96AA8 810 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 RHBDF1Q96CC6 855 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 RTP4Q96DX8 246 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 MED30Q96HR3 178 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 MARK4Q96L34 752 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 MTERF1Q99551 399 aaKnown RBP3.89□□□□□ -1.79
CD46-216ENST00000490278 CMKLR1Q99788 373 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 TMEM39BQ9GZU3 492 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 HIPK2Q9H2X6 1198 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 HRH4Q9H3N8 390 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 ZNF224Q9NZL3 707 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 SELENONQ9NZV5 590 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 SEC63Q9UGP8 760 aaKnown RBP3.89□□□□□ -1.79
CD46-216ENST00000490278 SIX4Q9UIU6 781 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 EXO1Q9UQ84 846 aaKnown RBP3.89□□□□□ -1.79
CD46-216ENST00000490278 SNX8Q9Y5X2 465 aa3.89□□□□□ -1.79
CD46-216ENST00000490278 LRRC72A6NJI9 287 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 SRRM3A6NNA2 597 aaPredicted RBP3.88□□□□□ -1.79
CD46-216ENST00000490278 CTDSP2O14595 271 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 MID1O15344 667 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 KCNN4O15554 427 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 MITFO75030 526 aaPredicted RBP3.88□□□□□ -1.79
CD46-216ENST00000490278 BEST1O76090 585 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 KCNK5O95279 499 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 PMS2P2O95744 297 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 STARD3NLO95772 234 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 LINC00271P0C7V0 271 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 DAOP14920 347 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 EIF2DP41214 584 aaKnown RBP3.88□□□□□ -1.79
CD46-216ENST00000490278 MSH2P43246 934 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 PDLIM4P50479 330 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 ZXDBP98169 803 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 PDE1BQ01064 536 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 KIF5AQ12840 1032 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 GRSF1Q12849 480 aaKnown RBP eCLIP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms