RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 MADDQ8WXG6 1647 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 C9orf84Q5VXU9 1444 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 RRBP1Q9P2E9 1410 aaKnown RBP3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 REREQ9P2R6 1566 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 CLIC1O00299 241 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 VWA5AO00534 786 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 ZNF263O14978 683 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 ZBTB43O43298 467 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 KLHL41O60662 606 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 RNF8O76064 485 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 FYNP06241 537 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 HEXBP07686 556 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 GALTP07902 379 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 PRPH2P23942 346 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 SKIV2L2P42285 1042 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 CRKLP46109 303 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 MTNR1AP48039 350 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 CLCN3P51790 818 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 LUMP51884 338 aaPredicted RBP3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 F2RL1P55085 397 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 TRA2BP62995 288 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 ADORA2A-AS1P86434 159 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 AIMP2Q13155 320 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 BFSP2Q13515 415 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 PDK1Q15118 436 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 DLG2Q15700 870 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 C2orf76Q3KRA6 126 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 C6orf163Q5TEZ5 329 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 DENND2CQ68D51 928 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 JADE1Q6IE81 842 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 KRT80Q6KB66 452 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 CCDC144NLQ6NUI1 221 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 C11orf88Q6PI97 169 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 PPP1R21Q6ZMI0 780 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 CFAP77Q6ZQR2 320 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 LINC00696Q6ZRV3 163 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 MOB3CQ70IA8 216 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 SLC46A3Q7Z3Q1 461 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 KRT27Q7Z3Y8 459 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 DHX40Q8IX18 779 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 MINDY1Q8N5J2 469 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 GSDMBQ8TAX9 411 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 SPATA18Q8TC71 538 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 RAB40AQ8WXH6 277 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 ROBO4Q8WZ75 1007 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 CNOT9Q92600 299 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 FAM162AQ96A26 154 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 TCEANC2Q96MN5 208 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 SIGLEC11Q96RL6 698 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 CD180Q99467 661 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 CRACR2AQ9BSW2 395 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 SPXQ9BT56 116 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 HSD3B7Q9H2F3 369 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 SLC22A11Q9NSA0 550 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 CYP39A1Q9NYL5 469 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 ABI3Q9P2A4 366 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 ZNF624Q9P2J8 865 aaPredicted RBP3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 CTNNAL1Q9UBT7 734 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 SEC63Q9UGP8 760 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 PLAGL1Q9UM63 463 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 LIPT1Q9Y234 373 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 RPH3AQ9Y2J0 694 aaPredicted RBP3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 COPG1Q9Y678 874 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 NFS1Q9Y697 457 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 TEX264Q9Y6I9 313 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 DNMT1P26358 1616 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 MROH1Q8NDA8 1641 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 ATP8B3O60423 1300 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 MAST1Q9Y2H9 1570 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 ADGBQ8N7X0 1667 aa3.23□□□□□ -1.89
DEPDC1-204ENST00000489862 TBC1D3DA0A087WVF3 549 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 TBC1D3IA0A087WXS9 549 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 TBC1D3EA0A087X179 549 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 TBC1D3KA0A087X1G2 549 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 LY6G6EA0A0G2JKS1 128 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 GOLGA6L10A0A0M3HER8 536 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 LRRD1A4D1F6 860 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 TBC1D3BA6NDS4 549 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 TBC1D3FA6NER0 549 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 MBD3L5A6NJ08 208 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 CDRT15L2A8MXV6 281 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 TBC1D3LB9A6J9 549 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 AKR1B15C9JRZ8 316 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 PSMA7O14818 248 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 PGRMC2O15173 223 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 NKX2-8O15522 239 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 SLC25A17O43808 307 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 TMPRSS11DO60235 418 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 CELF2O95319 508 aaKnown RBP3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 TBC1D3HP0C7X1 549 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 TSPY4P0CV99 314 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 TSPY10P0CW01 314 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 GZMAP12544 262 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 KRT13P13646 458 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 GPD2P43304 727 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 NT5C2P49902 561 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 HNMTP50135 292 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 LINC00205P59089 165 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 HMGN5P82970 282 aaKnown RBP3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 CFHR3Q02985 330 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms