RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 PRDM6Q9NQX0 595 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 PLLPQ9Y342 182 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 GOLGA8CPA6NN73 597 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 MAN2B1O00754 1011 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 ASMTLO95671 621 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 GSTA1P08263 222 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 SLC35E2BP0CK96 405 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 UGT1A6P19224 532 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 UGT1A1P22309 533 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 UGT1A4P22310 534 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 DRD3P35462 400 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 UGT1A3P35503 534 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 UGT1A5P35504 534 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 ETV3P41162 512 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 LIG3P49916 1009 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 RPS14P62263 151 aaKnown RBP21.52■■□□□ 1.04
SMC4-221ENST00000489573 ITGA9Q13797 1035 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 CCINQ13939 588 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 HSF5Q4G112 596 aaPredicted RBP21.52■■□□□ 1.04
SMC4-221ENST00000489573 TMEM52BQ4KMG9 183 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 PIP5KL1Q5T9C9 394 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 Q6ZVL8 140 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 TECPR1Q7Z6L1 1165 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 CLEC14AQ86T13 490 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 TAX1BP1Q86VP1 789 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 CACUL1Q86Y37 369 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 GDAP1Q8TB36 358 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 PAIP2Q9BPZ3 127 aaKnown RBP21.52■■□□□ 1.04
SMC4-221ENST00000489573 FAM83DQ9H4H8 585 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 PSD3Q9NYI0 1048 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 CD84Q9UIB8 345 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 GRID1Q9ULK0 1009 aa21.52■■□□□ 1.04
SMC4-221ENST00000489573 A0A087X1B8 175 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 A0A1W2PQF6 199 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 AGAP14A8MT82 685 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 NEMP1O14524 444 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 TOP3BO95985 862 aaKnown RBP21.51■■□□□ 1.03
SMC4-221ENST00000489573 COL9A1P20849 921 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 FDXRP22570 491 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 ACRV1P26436 265 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 FMO4P31512 558 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 LSP1P33241 339 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 ADARP55265 1226 aaKnown RBP21.51■■□□□ 1.03
SMC4-221ENST00000489573 CDKN2DP55273 166 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 IRF9Q00978 393 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 IL9RQ01113 521 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 ACOX1Q15067 660 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 NRSN1Q8IZ57 195 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 NXPE1Q8N323 547 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 AADATQ8N5Z0 425 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 DTX3LQ8TDB6 740 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 ULK4Q96C45 1275 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.51■■□□□ 1.03
SMC4-221ENST00000489573 ACOT9Q9Y305 439 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 FADS3Q9Y5Q0 445 aa21.51■■□□□ 1.03
SMC4-221ENST00000489573 MYO10Q9HD67 2058 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 OR1I1O60431 355 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 CA5AP35218 305 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 GMPRP36959 345 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 ETV4P43268 484 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 PGGT1BP53609 377 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 CCDC15Q0P6D6 951 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 ZNF460Q14592 562 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 ATP13A5Q4VNC0 1218 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 EOGTQ5NDL2 527 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 N4BP2L1Q5TBK1 243 aaPredicted RBP21.5■■□□□ 1.03
SMC4-221ENST00000489573 KYAT3Q6YP21 454 aaKnown RBP21.5■■□□□ 1.03
SMC4-221ENST00000489573 LCA5Q86VQ0 697 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 RBFAQ8N0V3 343 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 RPLP0P6Q8NHW5 317 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 COQ10AQ96MF6 247 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 TSNARE1Q96NA8 513 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 SPATA16Q9BXB7 569 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 NDRG2Q9UN36 371 aaKnown RBP21.5■■□□□ 1.03
SMC4-221ENST00000489573 COMMD10Q9Y6G5 202 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 F5P12259 2224 aa21.5■■□□□ 1.03
SMC4-221ENST00000489573 PRMT5O14744 637 aaPredicted RBP21.49■■□□□ 1.03
SMC4-221ENST00000489573 WNT9AO14904 365 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 DHRS4L1P0CG22 281 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 COL6A2P12110 1019 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 PKMP14618 531 aaKnown RBP21.49■■□□□ 1.03
SMC4-221ENST00000489573 ZNF7P17097 686 aaPredicted RBP21.49■■□□□ 1.03
SMC4-221ENST00000489573 CD72P21854 359 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 ZP2Q05996 745 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 GABPB1Q06547 395 aaPredicted RBP21.49■■□□□ 1.03
SMC4-221ENST00000489573 ZNF284Q2VY69 593 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 HENMT1Q5T8I9 393 aaKnown RBP21.49■■□□□ 1.03
SMC4-221ENST00000489573 AGBL4Q5VU57 503 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 ZNF852Q6ZMS4 543 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 CCDC91Q7Z6B0 441 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 PLD6Q8N2A8 252 aaKnown RBP21.49■■□□□ 1.03
SMC4-221ENST00000489573 HDDC3Q8N4P3 179 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 TRAM1L1Q8N609 369 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 CXorf40AQ8TE69 158 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 CKAP2Q8WWK9 683 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 SCAMP4Q969E2 229 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 DTD2Q96FN9 168 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 BIRC8Q96P09 236 aa21.49■■□□□ 1.03
SMC4-221ENST00000489573 MKRN2Q9H000 416 aaKnown RBP21.49■■□□□ 1.03
SMC4-221ENST00000489573 P2RY12Q9H244 342 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms