RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 PCDHGA12O60330 932 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 UGT1A9O60656 530 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 MTX2O75431 263 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 RASGRP1O95267 797 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 PRAMEF1O95521 474 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 ASMTLO95671 621 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 CEACAM5P06731 702 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 HOXC4P09017 264 aaPredicted RBP14.3□□□□□ -0.12
HLA-F-229ENST00000489502 UGT1A6P19224 532 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 UGT1A1P22309 533 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 UGT1A4P22310 534 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 KELP23276 732 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 MGAT1P26572 445 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 UGT1A3P35503 534 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 UGT1A5P35504 534 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 ADCY8P40145 1251 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 HNRNPKP61978 463 aaKnown RBP eCLIP14.3□□□□□ -0.12
HLA-F-229ENST00000489502 CKAP4Q07065 602 aaKnown RBP14.3□□□□□ -0.12
HLA-F-229ENST00000489502 C1orf61Q13536 156 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 KHDC1Q4VXA5 237 aaKnown RBP14.3□□□□□ -0.12
HLA-F-229ENST00000489502 PRRT3Q5FWE3 981 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 RNASEH2BQ5TBB1 312 aaKnown RBP14.3□□□□□ -0.12
HLA-F-229ENST00000489502 IZUMO3Q5VZ72 239 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 KANSL1Q7Z3B3 1105 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 PHYKPLQ8IUZ5 450 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 DEFB124Q8NES8 71 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 LMX1AQ8TE12 382 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 GLYATL1Q969I3 302 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 RUNDC3BQ96NL0 473 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 TRIM31Q9BZY9 425 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 CARS2Q9HA77 564 aaKnown RBP14.3□□□□□ -0.12
HLA-F-229ENST00000489502 UGT1A7Q9HAW7 530 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 UGT1A10Q9HAW8 530 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 UGT1A8Q9HAW9 530 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 CYP4F12Q9HCS2 524 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 SYBUQ9NX95 663 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 SLC2A6Q9UGQ3 507 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 TCAF1Q9Y4C2 921 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 MRFAP1Q9Y605 127 aa14.3□□□□□ -0.12
HLA-F-229ENST00000489502 GOLGA4Q13439 2230 aaKnown RBP14.3□□□□□ -0.12
HLA-F-229ENST00000489502 DCHS1Q96JQ0 3298 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 HEATR9A2RTY3 570 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 DNALI1O14645 258 aaPredicted RBP14.29□□□□□ -0.12
HLA-F-229ENST00000489502 FLRT2O43155 660 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 RAD51CO43502 376 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 PPFIA2O75334 1257 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 AVILO75366 819 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 FUCA1P04066 466 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 KCNA4P22459 653 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 DGKAP23743 735 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 GNPDA1P46926 289 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 ARSDP51689 593 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 HK3P52790 923 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 CDK16Q00536 496 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 PDE1BQ01064 536 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 DHX34Q14147 1143 aaKnown RBP14.29□□□□□ -0.12
HLA-F-229ENST00000489502 WHAMMP3Q1A5X7 153 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 ZDHHC20Q5W0Z9 365 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 PDPK2PQ6A1A2 396 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 SYDE1Q6ZW31 735 aaPredicted RBP14.29□□□□□ -0.12
HLA-F-229ENST00000489502 ZNF572Q7Z3I7 529 aaPredicted RBP14.29□□□□□ -0.12
HLA-F-229ENST00000489502 PPIL6Q8IXY8 311 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 NAT8LQ8N9F0 302 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 PPHLN1Q8NEY8 458 aaKnown RBP14.29□□□□□ -0.12
HLA-F-229ENST00000489502 SETD7Q8WTS6 366 aaKnown RBP14.29□□□□□ -0.12
HLA-F-229ENST00000489502 ZNF778Q96MU6 729 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 SLC13A1Q9BZW2 595 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 NLE1Q9NVX2 485 aaPredicted RBP14.29□□□□□ -0.12
HLA-F-229ENST00000489502 SUFUQ9UMX1 484 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 SLC17A4Q9Y2C5 497 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 PCDHGB2Q9Y5G2 931 aa14.29□□□□□ -0.12
HLA-F-229ENST00000489502 PCYT1BQ9Y5K3 369 aaPredicted RBP14.29□□□□□ -0.12
HLA-F-229ENST00000489502 DCDC2BA2VCK2 349 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 MROH6A6NGR9 719 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 OR51F1A6NGY5 319 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 AQP9O43315 295 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 SRP72O76094 671 aaKnown RBP14.28□□□□□ -0.12
HLA-F-229ENST00000489502 SLC25A14O95258 325 aaPredicted RBP14.28□□□□□ -0.12
HLA-F-229ENST00000489502 PRSS56P0CW18 603 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 IVDP26440 423 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 MC4RP32245 332 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 GRK6P43250 576 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 XIAPP98170 497 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 SLC14A1Q13336 389 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 PEX6Q13608 980 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 SMAD1Q15797 465 aaKnown RBP14.28□□□□□ -0.12
HLA-F-229ENST00000489502 INAVAQ3KP66 663 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 TSTD2Q5T7W7 516 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 LRRC8BQ6P9F7 803 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 PIP4P1Q86T03 277 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 CAND1Q86VP6 1230 aaKnown RBP14.28□□□□□ -0.12
HLA-F-229ENST00000489502 MPP5Q8N3R9 675 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 SLC25A45Q8N413 288 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 EID2Q8N6I1 236 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 OR13J1Q8NGT2 312 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 KIF18AQ8NI77 898 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 GDAP1Q8TB36 358 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 STYXQ8WUJ0 223 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 BTN2A2Q8WVV5 523 aa14.28□□□□□ -0.12
HLA-F-229ENST00000489502 SERPINB12Q96P63 405 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms