RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ATXN2LQ8WWM7 1075 aaKnown RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 CENPTQ96BT3 561 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 FAM111AQ96PZ2 611 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 AARSD1Q9BTE6 412 aaKnown RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 FAM83DQ9H4H8 585 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 ARHGEF3Q9NR81 526 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 SLC17A7Q9P2U7 560 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 NFKBIL1Q9UBC1 381 aaPredicted RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 DCDC2Q9UHG0 476 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 CD84Q9UIB8 345 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 FBXL21Q9UKT6 434 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 GRID1Q9ULK0 1009 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 CA14Q9ULX7 337 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 MRPS17Q9Y2R5 130 aaKnown RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 ACOT9Q9Y305 439 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 VWA7Q9Y334 891 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 PLLPQ9Y342 182 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 PCDHB1Q9Y5F3 818 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 COMMD10Q9Y6G5 202 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 MYO9BQ13459 2157 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 TRBV5-4A0A0C4DH59 114 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 CFAP99D6REC4 459 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 E5RI56 91 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 H3BMM5 538 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 PRMT5O14744 637 aaPredicted RBP9.95□□□□□ -0.82
USP11-211ENST00000489111 SPINT1O43278 529 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 AP1G1O43747 822 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 SHOX2O60902 331 aaPredicted RBP9.95□□□□□ -0.82
USP11-211ENST00000489111 ADAM23O75077 832 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 VPS26AO75436 327 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 ESR1P03372 595 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 APOA4P06727 396 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 PYGLP06737 847 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 SLC35E2BP0CK96 405 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 NEFHP12036 1026 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 COL6A2P12110 1019 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 C6P13671 934 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 PKMP14618 531 aaKnown RBP9.95□□□□□ -0.82
USP11-211ENST00000489111 UGT1A6P19224 532 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 UGT1A1P22309 533 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 UGT1A4P22310 534 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 FDXRP22570 491 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 AKT1P31749 480 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 LSP1P33241 339 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 UGT1A3P35503 534 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 UGT1A5P35504 534 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 CDKN2DP55273 166 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 IRF9Q00978 393 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 PRKCQQ04759 706 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 ZP2Q05996 745 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 GABPB1Q06547 395 aaPredicted RBP9.95□□□□□ -0.82
USP11-211ENST00000489111 PDAP1Q13442 181 aaKnown RBP9.95□□□□□ -0.82
USP11-211ENST00000489111 LRRC32Q14392 662 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 ZNF460Q14592 562 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 FAM83EQ2M2I3 478 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 TSNAXIP1Q2TAA8 658 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 TMEM52BQ4KMG9 183 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 IER5LQ5T953 404 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 PIP5KL1Q5T9C9 394 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 N4BP2L1Q5TBK1 243 aaPredicted RBP9.95□□□□□ -0.82
USP11-211ENST00000489111 PTRHD1Q6GMV3 140 aaKnown RBP9.95□□□□□ -0.82
USP11-211ENST00000489111 KIAA1211LQ6NV74 962 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 KLC3Q6P597 504 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.95□□□□□ -0.82
USP11-211ENST00000489111 RFLNAQ6ZTI6 216 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 CEP97Q8IW35 865 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 RAVER1Q8IY67 606 aaKnown RBP9.95□□□□□ -0.82
USP11-211ENST00000489111 HDDC3Q8N4P3 179 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 AADATQ8N5Z0 425 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 TRAM1L1Q8N609 369 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 DENND1AQ8TEH3 1009 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 NUS1Q96E22 293 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 DTD2Q96FN9 168 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 DCUN1D1Q96GG9 259 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 SCYL1Q96KG9 808 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 COQ10AQ96MF6 247 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 COPS8Q99627 209 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 OLFM1Q99784 485 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 ZSCAN5AQ9BUG6 496 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 RIOK2Q9BVS4 552 aaKnown RBP9.95□□□□□ -0.82
USP11-211ENST00000489111 POPDC3Q9HBV1 291 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 GPAMQ9HCL2 828 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 TAS2R13Q9NYV9 303 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 THEGQ9P2T0 379 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 TRMT6Q9UJA5 497 aaKnown RBP9.95□□□□□ -0.82
USP11-211ENST00000489111 GNPTGQ9UJJ9 305 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 MID2Q9UJV3 735 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 SORCS3Q9UPU3 1222 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 FADS3Q9Y5Q0 445 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 SZT2Q5T011 3432 aa9.95□□□□□ -0.82
USP11-211ENST00000489111 A0A1W2PP55 124 aa9.94□□□□□ -0.82
USP11-211ENST00000489111 A0A1W2PQF6 199 aa9.94□□□□□ -0.82
USP11-211ENST00000489111 F8W8V4 182 aa9.94□□□□□ -0.82
USP11-211ENST00000489111 TSPAN6O43657 245 aa9.94□□□□□ -0.82
USP11-211ENST00000489111 OR1I1O60431 355 aa9.94□□□□□ -0.82
USP11-211ENST00000489111 MMP20O60882 483 aa9.94□□□□□ -0.82
USP11-211ENST00000489111 RECQL5O94762 991 aaPredicted RBP9.94□□□□□ -0.82
USP11-211ENST00000489111 PCDH8O95206 1070 aa9.94□□□□□ -0.82
USP11-211ENST00000489111 ASMTLO95671 621 aa9.94□□□□□ -0.82
USP11-211ENST00000489111 TOP3BO95985 862 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms