RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 TFF2Q03403 129 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 IL10RBQ08334 325 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 ITKQ08881 620 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 FCHO2Q0JRZ9 810 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 ZNF423Q2M1K9 1284 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 PLEKHG6Q3KR16 790 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 KLC3Q6P597 504 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 CES3Q6UWW8 571 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 AMIGO2Q86SJ2 522 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 SNX32Q86XE0 403 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 SPATA22Q8NHS9 363 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 ATP2A3Q93084 1043 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 HLA-CQ95604 372 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 EXOC2Q96KP1 924 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 TEKT5Q96M29 485 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 MRPL1Q9BYD6 325 aaKnown RBP13.27□□□□□ -0.29
CHD1L-208ENST00000488864 FAM96AQ9H5X1 160 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 RETREG1Q9H6L5 497 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 WDR55Q9H6Y2 383 aaPredicted RBP13.27□□□□□ -0.29
CHD1L-208ENST00000488864 PDFQ9HBH1 243 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 OBP2AQ9NY56 170 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 KIAA1522Q9P206 1035 aaPredicted RBP13.27□□□□□ -0.29
CHD1L-208ENST00000488864 HEMK1Q9Y5R4 338 aaPredicted RBP13.27□□□□□ -0.29
CHD1L-208ENST00000488864 GMEB1Q9Y692 573 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 CEPT1Q9Y6K0 416 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 K7ERQ8 282 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 ADH1CP00326 375 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 MGAT1P26572 445 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 PIK3R1P27986 724 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 TYK2P29597 1187 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 CTSOP43234 321 aaPredicted RBP13.27□□□□□ -0.29
CHD1L-208ENST00000488864 ZNF33AQ06730 810 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 DSELQ8IZU8 1212 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 ELSPBP1Q96BH3 223 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 IL12RB2Q99665 862 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 PRDM6Q9NQX0 595 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 RPS6KL1Q9Y6S9 549 aa13.27□□□□□ -0.29
CHD1L-208ENST00000488864 MUC3AQ02505 3323 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 STX16-NPEPL1H3BU86 382 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 MUSKO15146 869 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 CFLARO15519 480 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 NFATC1O95644 943 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 HSPA4LO95757 839 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 MT-CYBP00156 380 aaPredicted RBP13.26□□□□□ -0.29
CHD1L-208ENST00000488864 FAM58BPP0C7Q3 252 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 CCDC166P0CW27 439 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 ERVK-10P10266 1014 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 DPP6P42658 865 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 SLC6A11P48066 632 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 RENBPP51606 427 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 ADARP55265 1226 aaKnown RBP13.26□□□□□ -0.29
CHD1L-208ENST00000488864 SMAD4Q13485 552 aaKnown RBP13.26□□□□□ -0.29
CHD1L-208ENST00000488864 CEACAM7Q14002 265 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 FLOT2Q14254 428 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 FUT11Q495W5 492 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 DUS1LQ6P1R4 473 aaKnown RBP13.26□□□□□ -0.29
CHD1L-208ENST00000488864 CYS1Q717R9 158 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 KDELC2Q7Z4H8 507 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 RBM12BQ8IXT5 1001 aaKnown RBP13.26□□□□□ -0.29
CHD1L-208ENST00000488864 PGBD5Q8N414 524 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 BHLHE22Q8NFJ8 381 aaPredicted RBP13.26□□□□□ -0.29
CHD1L-208ENST00000488864 CEP70Q8NHQ1 597 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 SORCS1Q8WY21 1168 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 ABTB1Q969K4 478 aaPredicted RBP13.26□□□□□ -0.29
CHD1L-208ENST00000488864 CATSPER2Q96P56 530 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 TRMT61BQ9BVS5 477 aaKnown RBP13.26□□□□□ -0.29
CHD1L-208ENST00000488864 UBA2Q9UBT2 640 aaPredicted RBP13.26□□□□□ -0.29
CHD1L-208ENST00000488864 LIMD1Q9UGP4 676 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 CIDEBQ9UHD4 219 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 MYO10Q9HD67 2058 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 DENND4AQ7Z401 1863 aa13.26□□□□□ -0.29
CHD1L-208ENST00000488864 NEMP1O14524 444 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 CD160O95971 181 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 PABPC1P11940 636 aaKnown RBP13.25□□□□□ -0.29
CHD1L-208ENST00000488864 STK19P49842 368 aaPredicted RBP13.25□□□□□ -0.29
CHD1L-208ENST00000488864 SEMA5AQ13591 1074 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 CYLC2Q14093 348 aaPredicted RBP13.25□□□□□ -0.29
CHD1L-208ENST00000488864 GEN1Q17RS7 908 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 AAK1Q2M2I8 961 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 PIGGQ5H8A4 983 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 PITRM1Q5JRX3 1037 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 ATXN7L3BQ96GX2 97 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 LMLNQ96KR4 655 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 KLHL32Q96NJ5 620 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 C2orf49Q9BVC5 232 aaPredicted RBP13.25□□□□□ -0.29
CHD1L-208ENST00000488864 LIN28AQ9H9Z2 209 aaKnown RBP13.25□□□□□ -0.29
CHD1L-208ENST00000488864 MARK1Q9P0L2 795 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 FCF1Q9Y324 198 aaKnown RBP13.25□□□□□ -0.29
CHD1L-208ENST00000488864 SMAD6O43541 496 aaKnown RBP13.25□□□□□ -0.29
CHD1L-208ENST00000488864 USP12O75317 370 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 TULP3O75386 442 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 TRMUO75648 421 aaKnown RBP13.25□□□□□ -0.29
CHD1L-208ENST00000488864 CCR10P46092 362 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 SOX9P48436 509 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 HTR4Q13639 388 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 RUNX3Q13761 415 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 ZNF235Q14590 738 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 HSP90AA5PQ58FG0 334 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 TMEM215Q68D42 235 aa13.25□□□□□ -0.29
CHD1L-208ENST00000488864 ZNF783Q6ZMS7 281 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms