RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 NDUFAF2Q8N183 169 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 PTCD2Q8WV60 388 aaKnown RBP7.58□□□□□ -1.2
PDPN-205ENST00000487038 SPOCK2Q92563 424 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 AP2M1Q96CW1 435 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 ELMO2Q96JJ3 720 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 TIGD1Q96MW7 591 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 TGM7Q96PF1 710 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 TBC1D10AQ9BXI6 508 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 MFRPQ9BY79 579 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 PDE7BQ9NP56 450 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 LUZP4Q9P127 313 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 VPS18Q9P253 973 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 PLEKHM1Q9Y4G2 1056 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 ANKHD1Q8IWZ3 2542 aaKnown RBP7.58□□□□□ -1.2
PDPN-205ENST00000487038 NIPBLQ6KC79 2804 aaeCLIP7.58□□□□□ -1.2
PDPN-205ENST00000487038 SSU72P8A0A1W2PR75 194 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 FAM170AA1A519 330 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 ANKRD62A6NC57 917 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 C2CD4BA6NLJ0 364 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 KLHL41O60662 606 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 UBXN7O94888 489 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 CBX6O95503 412 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 PNMA6AP0CW24 399 aaPredicted RBP7.57□□□□□ -1.2
PDPN-205ENST00000487038 AMD1P17707 334 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 GPD1P21695 349 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 PTPN4P29074 926 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 RFC1P35251 1148 aaPredicted RBP7.57□□□□□ -1.2
PDPN-205ENST00000487038 HSPA9P38646 679 aaKnown RBP7.57□□□□□ -1.2
PDPN-205ENST00000487038 RRADP55042 308 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 GFERP55789 205 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 STX17P56962 302 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 SH3BP2P78314 561 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 APBA1Q02410 837 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 ZNF235Q14590 738 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 ZXDCQ2QGD7 858 aaPredicted RBP7.57□□□□□ -1.2
PDPN-205ENST00000487038 RAB6CQ53S08 254 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 NAA35Q5VZE5 725 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 SCYL2Q6P3W7 929 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 IYDQ6PHW0 289 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 PRSS42Q7Z5A4 293 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 HSD11B1LQ7Z5J1 315 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 BPHLQ86WA6 291 aaPredicted RBP7.57□□□□□ -1.2
PDPN-205ENST00000487038 ZNF677Q86XU0 584 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 TRIM48Q8IWZ4 208 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 PYROXD2Q8N2H3 581 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 BBS5Q8N3I7 341 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 Q8NA96 180 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 GPT2Q8TD30 523 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 CPA5Q8WXQ8 436 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 CENPIQ92674 756 aaPredicted RBP7.57□□□□□ -1.2
PDPN-205ENST00000487038 RNF31Q96EP0 1072 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 FCRL4Q96PJ5 515 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 PSKH2Q96QS6 385 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 SELENOOQ9BVL4 669 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 RAB6CQ9H0N0 254 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 LRRC19Q9H756 370 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 RMI1Q9H9A7 625 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 UCK1Q9HA47 277 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 GPR83Q9NYM4 423 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 TMEM63CQ9P1W3 806 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 CPNE7Q9UBL6 633 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 ZNHIT2Q9UHR6 403 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 MAN1B1Q9UKM7 699 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 RARRES3Q9UL19 164 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 TMEM98Q9Y2Y6 226 aa7.57□□□□□ -1.2
PDPN-205ENST00000487038 MED13LQ71F56 2210 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 ABCA2Q9BZC7 2435 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 NPIPB15A6NHN6 443 aaPredicted RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 EIF3CLB5ME19 914 aaKnown RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 PPP1R3GB7ZBB8 358 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 HTRA2O43464 458 aaPredicted RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 SNX2O60749 519 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 CPNE3O75131 537 aaKnown RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 CEACAM4O75871 244 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 MTA2O94776 668 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 TMEM63AO94886 807 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 VIPP01282 170 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 KRT3P12035 628 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 ACP5P13686 325 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 PRKCSHP14314 528 aaPredicted RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 ZNF30P17039 623 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 LPOP22079 712 aaPredicted RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 LHCGRP22888 699 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 PTGIRP43119 386 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 MTIF2P46199 727 aaKnown RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 CAPZBP47756 277 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 PAPOLAP51003 745 aaKnown RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 ITGA1P56199 1179 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 RPS18P62269 152 aaKnown RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 CDK18Q07002 472 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 IL10RBQ08334 325 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 TUBB3Q13509 450 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 IL10RAQ13651 578 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 LBRQ14739 615 aaKnown RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 TMCO4Q5TGY1 634 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 CACHD1Q5VU97 1274 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 LYPLAL1Q5VWZ2 237 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 Q6ZVL8 140 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 MED25Q71SY5 747 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 ZNF765Q7L2R6 523 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms