RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 RPS17P08708 135 aaKnown RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 THRAP10827 490 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 NFKBIAP25963 317 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 PGM1P36871 562 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 ATP4BP51164 291 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 LBX1P52954 281 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 IL2P60568 153 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 NFATC2Q13469 925 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 ZRSR2Q15696 482 aaKnown RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 MYLK3Q32MK0 819 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 ZRANB3Q5FWF4 1079 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 DGKKQ5KSL6 1271 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 VWA5B1Q5TIE3 1220 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 METTL2BQ6P1Q9 378 aaKnown RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 PAQR3Q6TCH7 311 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 TPGS1Q6ZTW0 290 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 EFL1Q7Z2Z2 1120 aaKnown RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 NET1Q7Z628 596 aaPredicted RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 RAVER1Q8IY67 606 aaKnown RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 AHI1Q8N157 1196 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 PELI3Q8N2H9 469 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 HCAR2Q8TDS4 363 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 AGAP11Q8TF27 550 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 EID2BQ96D98 161 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 LRIG1Q96JA1 1093 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 PLEKHG4BQ96PX9 1271 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 OR52B2Q96RD2 323 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 GPR21Q99679 349 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 HTATIP2Q9BUP3 242 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 DENND2DQ9H6A0 471 aaPredicted RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 DCLRE1BQ9H816 532 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 LATS2Q9NRM7 1088 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 HCFC1R1Q9NWW0 138 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 FBXO10Q9UK96 956 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 CCL26Q9Y258 94 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 DHRS7Q9Y394 339 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 C1orf232A0A0U1RR37 186 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 RGSL1A5PLK6 1076 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 SCAMP3O14828 347 aaKnown RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 DCXO43602 365 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 PRAMEF1O95521 474 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 ASLP04424 464 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 COX4I1P13073 169 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 ZNF30P17039 623 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 GJA1P17302 382 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 FMO4P31512 558 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 SPAM1P38567 509 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 KCNC1P48547 511 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 ECT2LQ008S8 904 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 KDSRQ06136 332 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 LCP2Q13094 533 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 OR4D1Q15615 310 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 SLC5A9Q2M3M2 681 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 UNC50Q53HI1 259 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 CARD16Q5EG05 197 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 SWT1Q5T5J6 900 aaKnown RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 WLSQ5T9L3 541 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 C6orf163Q5TEZ5 329 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 BRAT1Q6PJG6 821 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 MACC1Q6ZN28 852 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 ADAMTSL2Q86TH1 951 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 CLYBLQ8N0X4 340 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 PTGR2Q8N8N7 351 aaPredicted RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 WFIKKN2Q8TEU8 576 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 FUBP1Q96AE4 644 aaKnown RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 TCEAL4Q96EI5 215 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 SGF29Q96ES7 293 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 CCT7Q99832 543 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 BBS2Q9BXC9 721 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 NUSAP1Q9BXS6 441 aaKnown RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 NUF2Q9BZD4 464 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 SUV39H2Q9H5I1 410 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 EBF2Q9HAK2 575 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 ZBTB26Q9HCK0 441 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 GNPTGQ9UJJ9 305 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 KIF26AQ9ULI4 1882 aaPredicted RBP11.87□□□□□ -0.51
PKP4-213ENST00000486254 A8MUI8 341 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 E9PBE3 544 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 HOXC11O43248 304 aaPredicted RBP11.87□□□□□ -0.51
PKP4-213ENST00000486254 CCNT2O60583 730 aaKnown RBP11.87□□□□□ -0.51
PKP4-213ENST00000486254 KLHL41O60662 606 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 VPS4BO75351 444 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 RFPL2O75678 378 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 PRAMEF12O95522 483 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 TYRP14679 529 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 NCF2P19878 526 aaPredicted RBP11.87□□□□□ -0.51
PKP4-213ENST00000486254 ACRV1P26436 265 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 EPHA3P29320 983 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 GCKP35557 465 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 HNF1BP35680 557 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 MRPL19P49406 292 aaKnown RBP11.87□□□□□ -0.51
PKP4-213ENST00000486254 CLCN7P51798 805 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 DCDC1P59894 354 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 POLR2LP62875 67 aaKnown RBP11.87□□□□□ -0.51
PKP4-213ENST00000486254 MAPRE2Q15555 327 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 TMEM25Q86YD3 366 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 SCUBE1Q8IWY4 988 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 ULK2Q8IYT8 1036 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 PHTF2Q8N3S3 785 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 FBXO39Q8N4B4 442 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms