RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 A8MU76 341 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 CDC7O00311 574 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 TRIM24O15164 1050 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 OR4F21O95013 312 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 GOT2P00505 430 aaKnown RBP12.65□□□□□ -0.38
VPS52-218ENST00000482399 SMPD1P17405 629 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 VARSP26640 1264 aaKnown RBP12.65□□□□□ -0.38
VPS52-218ENST00000482399 OR4D2P58180 307 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 TSPY1Q01534 308 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 PPTC7Q8NI37 304 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 PSMA8Q8TAA3 256 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 TMBIM1Q969X1 311 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 BIRC7Q96CA5 298 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 HMCESQ96FZ2 354 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 DACH2Q96NX9 599 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 SLC2A11Q9BYW1 496 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 MEAF6Q9HAF1 191 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 SLC27A5Q9Y2P5 690 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 WNK3Q9BYP7 1800 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 MATN3O15232 486 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 CD3EAPO15446 510 aaKnown RBP12.65□□□□□ -0.38
VPS52-218ENST00000482399 CNTN5O94779 1100 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 BMP10O95393 424 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 NADKO95544 446 aaPredicted RBP12.65□□□□□ -0.38
VPS52-218ENST00000482399 FTH1P02794 183 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 CYBBP04839 570 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 CTBSQ01459 385 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 FPGSQ05932 587 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 TNK2Q07912 1038 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 BNIP2Q12982 314 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 PSMD5Q16401 504 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 UBR3Q6ZT12 1888 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 FCRL5Q96RD9 977 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 TMEM209Q96SK2 561 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 CORINQ9Y5Q5 1042 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 PTPRFP10586 1907 aa12.65□□□□□ -0.39
VPS52-218ENST00000482399 A8MX80 341 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 XPNPEP2O43895 674 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 SH3BGRLO75368 114 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 CNPP09543 421 aaKnown RBP12.64□□□□□ -0.39
VPS52-218ENST00000482399 LHX1P48742 406 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 HERVK_113P63132 956 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 PFKPQ01813 784 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 NFATC3Q12968 1075 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 DDR2Q16832 855 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 CCDC92Q53HC0 331 aaPredicted RBP12.64□□□□□ -0.39
VPS52-218ENST00000482399 CCNYL2Q5T2Q4 361 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 C6orf183Q5T699 404 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 KIAA0930Q6ICG6 404 aaPredicted RBP12.64□□□□□ -0.39
VPS52-218ENST00000482399 PRMT9Q6P2P2 845 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ISCA2Q86U28 154 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 PLD3Q8IV08 490 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 PSD4Q8NDX1 1056 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 CASP10Q92851 521 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 TEX37Q96LM6 180 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 SMIM14Q96QK8 99 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ZBTB18Q99592 522 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 HERC2P3Q9BVR0 1158 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ERVK-6Q9BXR3 956 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 PRDM16Q9HAZ2 1276 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 RASSF1Q9NS23 344 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ACTR3BQ9P1U1 418 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 EIF2B4Q9UI10 523 aaKnown RBP12.64□□□□□ -0.39
VPS52-218ENST00000482399 PADI4Q9UM07 663 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ATP11BQ9Y2G3 1177 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 A0A1B0GTL3 188 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 DLGAP3O95886 979 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 FUCA1P04066 466 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 THRBP10828 461 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 BMP2P12643 396 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 CCNCP24863 283 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ARCN1P48444 511 aaKnown RBP12.64□□□□□ -0.39
VPS52-218ENST00000482399 CLK1P49759 484 aaKnown RBP12.64□□□□□ -0.39
VPS52-218ENST00000482399 POLR2JP52435 117 aaKnown RBP12.64□□□□□ -0.39
VPS52-218ENST00000482399 RAD51Q06609 339 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 FSCN1Q16658 493 aaKnown RBP12.64□□□□□ -0.39
VPS52-218ENST00000482399 MFSD4BQ5TF39 518 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ANKRD34AQ69YU3 496 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 NANOGP8Q6NSW7 305 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 TIGD7Q6NT04 549 aaPredicted RBP12.64□□□□□ -0.39
VPS52-218ENST00000482399 BORAQ6PGQ7 559 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 TBPL2Q6SJ96 375 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ANGPTL8Q6UXH0 198 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 NCCRP1Q6ZVX7 275 aaPredicted RBP12.64□□□□□ -0.39
VPS52-218ENST00000482399 CILP2Q8IUL8 1156 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 TBC1D21Q8IYX1 336 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ANKFN1Q8N957 763 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ZMIZ2Q8NF64 920 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 OR7A2PQ8NGA2 310 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 OR10A6Q8NH74 314 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.64□□□□□ -0.39
VPS52-218ENST00000482399 ULK4Q96C45 1275 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ROPN1LQ96C74 230 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 GPR21Q99679 349 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 FEM1AQ9BSK4 669 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 MRGBPQ9NV56 204 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ZNHIT2Q9UHR6 403 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 NOD1Q9Y239 953 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 SLC30A1Q9Y6M5 507 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 RBBP6Q7Z6E9 1792 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms